Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

29 transcription factors

BARX2 1 dataset

Motif DE_36h DE_36h-BARX2_MA1471.2 9 bp overlap

CHD7 1 dataset

ChIP hiPSC_derived_lt-NES GSE108506.CHD7.hiPSC_derived_lt-NES 86 bp overlap

DMRTA1 1 dataset

Motif DE_36h DE_36h-DMRTA1_MA1707.2 10 bp overlap

EOMES 1 dataset

ChIP hESC GSE26097.EOMES.hESC 158 bp overlap

ERG 1 dataset

ChIP VCaP GSE49091.ERG.VCaP 107 bp overlap

FOXA2 2 datasets

ChIP DE DE-FOXA2-1 181 bp overlap

ChIP DE DE-FOXA2-2 181 bp overlap

FOXH1 1 dataset

Motif DE_36h DE_36h-FOXH1_MA0479.2 8 bp overlap

GATA2 1 dataset

Motif DE_36h DE_36h-GATA2_MA0036.4 7 bp overlap

GATA4 4 datasets

ChIP DE DE-GATA4-1 181 bp overlap

ChIP DE DE-GATA4-2 181 bp overlap

Motif DE_36h DE_36h-GATA4_MA0482.3 8 bp overlap

ChIP foregut GSE117136.GATA4.foregut 181 bp overlap

GATA6 9 datasets

ChIP DE DE-GATA6-1 181 bp overlap

ChIP DE DE-GATA6-2 181 bp overlap

Motif DE_36h DE_36h-GATA6_MA1104.3 8 bp overlap

ChIP DE_D1 S09-DE-d1-GATA6-exp1 181 bp overlap

ChIP DE_D1 S14-DE-d1-GATA6-exp1 181 bp overlap

ChIP DE_D1 S41-DE-d1-GATA6-exp2 181 bp overlap

ChIP DE_D2 S55-DE-d2-GATA6-exp2 181 bp overlap

ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 181 bp overlap

ChIP foregut GSE117136.GATA6.foregut 181 bp overlap

Gata3 1 dataset

Motif DE_36h DE_36h-Gata3_MA0037.5 8 bp overlap

HOXA4 1 dataset

Motif DE_36h DE_36h-HOXA4_MA1496.2 7 bp overlap

HOXB4 1 dataset

Motif DE_36h DE_36h-HOXB4_MA1499.2 6 bp overlap

HOXC4 1 dataset

Motif DE_36h DE_36h-HOXC4_MA1504.2 6 bp overlap

HOXD4 1 dataset

Motif DE_36h DE_36h-HOXD4_MA1507.2 6 bp overlap

MAX::MYC 1 dataset

Motif DE_36h DE_36h-MAXMYC_MA0059.2 10 bp overlap

MXI1 1 dataset

Motif DE_36h DE_36h-MXI1_MA1108.3 6 bp overlap

NEUROD1 1 dataset

ChIP D283-Med GSE92582.NEUROD1.D283-Med 176 bp overlap

POU6F1 1 dataset

Motif DE_36h DE_36h-POU6F1_MA1549.2 7 bp overlap

REST 1 dataset

ChIP neural ENCSR000BTV.REST.neural 138 bp overlap

SMAD2-3 3 datasets

ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 181 bp overlap

ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 181 bp overlap

ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 181 bp overlap

SMAD2_3 4 datasets

ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 181 bp overlap

ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 181 bp overlap

ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 181 bp overlap

ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 181 bp overlap

SOX17_M 1 dataset

ChIP DE_D2 DED2-SOX17-M_Batch_II 158 bp overlap

SOX2 1 dataset

ChIP HNSC GSE69479.SOX2.HNSC 181 bp overlap

TAF1 1 dataset

ChIP PFSK-1 ENCFF982LZL 181 bp overlap

TCF7L1 1 dataset

Motif DE_36h DE_36h-TCF7L1_MA1421.1 12 bp overlap

TRPS1 1 dataset

Motif DE_36h DE_36h-TRPS1_MA1970.2 8 bp overlap

ZNF354C 1 dataset

Motif DE_36h DE_36h-ZNF354C_MA0130.1 6 bp overlap

ZNF85 1 dataset

Motif DE_36h DE_36h-ZNF85_MA1720.2 12 bp overlap

Genome Browser