chr1 : 164,565,381 164,565,639
258 bp 34 TFs 1 linked gene
This 258 bp open chromatin element is linked to PBX1 and is bound by 34 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
PBX1 6.2 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr1:164,560,381 – 164,570,639
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
34 transcription factors
Source
Cell type
ASH2L 1 dataset
ChIP WA01 ENCSR850KIP.ASH2L.WA01 117 bp overlap
BRD3 1 dataset
ChIP HEK293T GSE39579.BRD3.HEK293T 165 bp overlap
BRD4 3 datasets
ChIP HEK293T GSE39579.BRD4.HEK293T 199 bp overlap
ChIP HFOB_DIFF GSE82295.BRD4.HFOB_DIFF 258 bp overlap
ChIP SUM185_DMSO GSE63581.BRD4.SUM185_DMSO 255 bp overlap
CTCF 1 dataset
ChIP thyroid gland ENCFF204HWS 209 bp overlap
FOS 1 dataset
ChIP myometrium_PT967 GSE128230.FOS.myometrium_PT967 102 bp overlap
FOXA1 1 dataset
ChIP breast-cancer_Veh-2856 GSE128018.FOXA1.breast-cancer_Veh-2856 258 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 251 bp overlap
ChIP DE DE-FOXA2-2 228 bp overlap
GATA4 1 dataset
ChIP DE DE-GATA4-2 258 bp overlap
GATA6 3 datasets
ChIP DE DE-GATA6-2 235 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 258 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 258 bp overlap
KDM5B 1 dataset
ChIP SUM185_SHCTCF GSE46055.KDM5B.SUM185_SHCTCF 140 bp overlap
MED1 1 dataset
ChIP cardiomyocyte_5 GSE85628.MED1.cardiomyocyte_5 213 bp overlap
NANOG 6 datasets
ChIP HUES-8 GSE109524.NANOG.HUES-8 129 bp overlap
ChIP WA01 ERP004238.NANOG.WA01 258 bp overlap
ChIP WA01 ENCSR000BMT.NANOG.WA01 130 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 258 bp overlap
ChIP WA09 GSE105028.NANOG.WA09 189 bp overlap
ChIP WA09_heat-shock GSE105028.NANOG.WA09_heat-shock 145 bp overlap
NKX2-1 2 datasets
ChIP H9_derived-cIN GSE99937.NKX2-1.H9_derived-cIN 233 bp overlap
ChIP NCI-H1819 GSE39998.NKX2-1.NCI-H1819 238 bp overlap
NKX2-5 2 datasets
ChIP hESC_ab3584 GSE89457.NKX2-5.hESC_ab3584 246 bp overlap
ChIP hESC_sc-14033 GSE89457.NKX2-5.hESC_sc-14033 175 bp overlap
PDX1 1 dataset
ChIP hiPSC GSE125768.PDX1.hiPSC 79 bp overlap
POLR2A 1 dataset
ChIP thyroid gland ENCFF979LRR 258 bp overlap
PRDM6 1 dataset
ChIP HEK293 ENCSR892QHR.PRDM6.HEK293 178 bp overlap
SIN3A 1 dataset
ChIP WA01 ENCSR000EBO.SIN3A.WA01 158 bp overlap
SMARCA4 3 datasets
ChIP NSC GSE125033.SMARCA4.NSC 161 bp overlap
ChIP TTC-1240_delC GSE124903.SMARCA4.TTC-1240_delC 101 bp overlap
ChIP hiPSC GSE124903.SMARCA4.hiPSC 218 bp overlap
SMARCC1 3 datasets
ChIP ESC S25-ESC-d0-BAF155-exp1 258 bp overlap
ChIP HS-SY-2 GSE108025.SMARCC1.HS-SY-2 190 bp overlap
ChIP hiPSC_WT GSE124903.SMARCC1.hiPSC_WT 59 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 129 bp overlap
SPDEF 1 dataset
ChIP A-549 GSE86957.SPDEF.A-549 130 bp overlap
TBX5 3 datasets
ChIP G296S GSE85628.TBX5.G296S 175 bp overlap
ChIP G296S_2 GSE85628.TBX5.G296S_2 175 bp overlap
ChIP cardiomyocyte_5 GSE85628.TBX5.cardiomyocyte_5 194 bp overlap
TEAD1 6 datasets
ChIP H69 GSE62274.TEAD1.H69 124 bp overlap
ChIP HEK293_siE1A GSE130135.TEAD1.HEK293_siE1A 182 bp overlap
ChIP HUCCT1 GSE68296.TEAD1.HUCCT1 167 bp overlap
ChIP MSTO GSE68170.TEAD1.MSTO 219 bp overlap
ChIP keratinocyte GSE138727.TEAD1.keratinocyte 203 bp overlap
ChIP pancreas_12D ERP008682.TEAD1.pancreas_12D 179 bp overlap
TEAD4 4 datasets
ChIP BJ_fibroblast_CD13-neg GSE114367.TEAD4.BJ_fibroblast_CD13-neg 208 bp overlap
ChIP ESC S26-ESC-d0-TEAD4-exp1 258 bp overlap
ChIP H1 ENCFF778PAX 179 bp overlap
ChIP HEK293_siCtrl GSE130135.TEAD4.HEK293_siCtrl 147 bp overlap
VDR 2 datasets
ChIP kidney-cortex GSE129585.VDR.kidney-cortex 95 bp overlap
ChIP primary-prostate-epithelial-cell GSE124576.VDR.primary-prostate-epithelial-cell 204 bp overlap
YAP1 1 dataset
ChIP hiPSC GSE111930.YAP1.hiPSC 118 bp overlap
ZNF384 1 dataset
ChIP HEK293T ENCFF019DZX 138 bp overlap
ZNF423 2 datasets
ChIP HEK293 ENCFF937QHI 258 bp overlap
ChIP WTC11 ENCFF574PBR 249 bp overlap
ZNF462 2 datasets
ChIP GM23338 ENCFF896CCA 172 bp overlap
ChIP GM23338 ENCSR334UWP.ZNF462.GM23338 112 bp overlap
ZSCAN4 2 datasets
ChIP HEK293 ENCFF381BKT 258 bp overlap
ChIP HEK293 ENCSR211GNP.ZSCAN4.HEK293 241 bp overlap