chr7 : 86,642,358 – 86,642,804
446 bp 41 TFs 1 linked gene
This 446 bp open chromatin element is linked to GRM3 and is bound by 41 transcription factors.
Linked Genes
1 gene
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
GRM3 1.1 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr7:86,637,358 – 86,647,804
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
41 transcription factors
Source
Cell type
AR 1 dataset
ChIP LNCaP GSE80256.AR.LNCaP 189 bp overlap
ATF3 1 dataset
ChIP HCT-116_DMSO GSE74355.ATF3.HCT-116_DMSO 103 bp overlap
CEBPA 2 datasets
Motif DE_48h DE_48h-CEBPA_MA0102.5 10 bp overlap
Motif DE_60h DE_60h-CEBPA_MA0102.5 10 bp overlap
CEBPD 2 datasets
Motif DE_48h DE_48h-CEBPD_MA0836.3 8 bp overlap
Motif DE_60h DE_60h-CEBPD_MA0836.3 8 bp overlap
CHD8 1 dataset
ChIP T-47D_R5020_5 GSE62428.CHD8.T-47D_R5020_5 176 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 377 bp overlap
ERG 1 dataset
ChIP VCaP GSE49091.ERG.VCaP 186 bp overlap
EZH2 1 dataset
ChIP A-673 ENCSR179SAO.EZH2.A-673 259 bp overlap
EZH2_phosphoT487 1 dataset
ChIP hepatocyte ENCSR341VYI.EZH2_phosphoT487.hepatocyte 253 bp overlap
FOXA1 1 dataset
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA1.pancreatic-progenitor_PP1 257 bp overlap
FOXA2 4 datasets
ChIP DE DE-FOXA2-1 446 bp overlap
ChIP DE DE-FOXA2-2 446 bp overlap
ChIP pancreas_CARN1618 ERP008682.FOXA2.pancreas_CARN1618 125 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA2.pancreatic-progenitor_PP1 401 bp overlap
FOXB1 2 datasets
Motif DE_48h DE_48h-FOXB1_MA0845.1 11 bp overlap
Motif DE_60h DE_60h-FOXB1_MA0845.1 11 bp overlap
FOXC1 2 datasets
Motif DE_48h DE_48h-FOXC1_MA0032.2 11 bp overlap
Motif DE_60h DE_60h-FOXC1_MA0032.2 11 bp overlap
FOXC2 2 datasets
Motif DE_48h DE_48h-FOXC2_MA0846.2 11 bp overlap
Motif DE_60h DE_60h-FOXC2_MA0846.2 11 bp overlap
FOXD2 2 datasets
Motif DE_48h DE_48h-FOXD2_MA0847.4 11 bp overlap
Motif DE_60h DE_60h-FOXD2_MA0847.4 11 bp overlap
FOXE1 2 datasets
Motif DE_48h DE_48h-FOXE1_MA1487.3 12 bp overlap
Motif DE_60h DE_60h-FOXE1_MA1487.3 12 bp overlap
FOXS1 2 datasets
Motif DE_48h DE_48h-FOXS1_MA2118.1 8 bp overlap
Motif DE_60h DE_60h-FOXS1_MA2118.1 8 bp overlap
GATA1::TAL1 1 dataset
Motif DE_60h DE_60h-GATA1TAL1_MA0140.3 17 bp overlap
GATA4 6 datasets
ChIP DE DE-GATA4-1 446 bp overlap
ChIP DE DE-GATA4-2 446 bp overlap
ChIP Hep-G2 GSE135714.GATA4.Hep-G2 373 bp overlap
ChIP foregut GSE117136.GATA4.foregut 293 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 421 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 446 bp overlap
GATA6 8 datasets
ChIP DE DE-GATA6-1 446 bp overlap
ChIP DE DE-GATA6-2 446 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 266 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 395 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 264 bp overlap
ChIP foregut GSE117136.GATA6.foregut 446 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA6.pancreatic-progenitor 430 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA6.pancreatic-progenitor_PP1 441 bp overlap
HMBOX1 2 datasets
Motif DE_48h DE_48h-HMBOX1_MA0895.2 7 bp overlap
Motif DE_60h DE_60h-HMBOX1_MA0895.2 7 bp overlap
KDM1A 3 datasets
ChIP pancreatic-progenitor_GT GSE104840.KDM1A.pancreatic-progenitor_GT 206 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.KDM1A.pancreatic-progenitor_PP1 356 bp overlap
ChIP pancreatic-progenitor_PP2-KDM1A-inh GSE104840.KDM1A.pancreatic-progenitor_PP2-KDM1A-inh 395 bp overlap
KLF9 1 dataset
Motif DE_48h DE_48h-KLF9_MA1107.3 11 bp overlap
MAFB 1 dataset
ChIP islet ERP004003.MAFB.islet 150 bp overlap
MAFF 4 datasets
Motif DE_48h DE_48h-MAFF_MA0495.4 11 bp overlap
Motif DE_48h DE_48h-MAFF_MA0495.4 11 bp overlap
Motif DE_60h DE_60h-MAFF_MA0495.4 11 bp overlap
Motif DE_60h DE_60h-MAFF_MA0495.4 11 bp overlap
Mafb 4 datasets
Motif DE_48h DE_48h-Mafb_MA0117.3 11 bp overlap
Motif DE_48h DE_48h-Mafb_MA0117.3 11 bp overlap
Motif DE_60h DE_60h-Mafb_MA0117.3 11 bp overlap
Motif DE_60h DE_60h-Mafb_MA0117.3 11 bp overlap
NRL 4 datasets
Motif DE_48h DE_48h-NRL_MA0842.3 12 bp overlap
Motif DE_48h DE_48h-NRL_MA0842.3 12 bp overlap
Motif DE_60h DE_60h-NRL_MA0842.3 12 bp overlap
Motif DE_60h DE_60h-NRL_MA0842.3 12 bp overlap
REST 2 datasets
Motif DE_48h DE_48h-REST_MA0138.3 20 bp overlap
Motif DE_60h DE_60h-REST_MA0138.3 20 bp overlap
Rhox11 2 datasets
Motif DE_48h DE_48h-Rhox11_MA0629.2 9 bp overlap
Motif DE_60h DE_60h-Rhox11_MA0629.2 9 bp overlap
SMAD2 1 dataset
ChIP endoderm GSE29422.SMAD2.endoderm 249 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 316 bp overlap
SMAD2_3 1 dataset
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 330 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 344 bp overlap
T 1 dataset
ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 338 bp overlap
TFAP4::FLI1 2 datasets
Motif DE_48h DE_48h-TFAP4FLI1_MA1967.2 14 bp overlap
Motif DE_60h DE_60h-TFAP4FLI1_MA1967.2 14 bp overlap
ZBTB24 1 dataset
ChIP HCT-116 GSE111683.ZBTB24.HCT-116 94 bp overlap
ZNF140 2 datasets
Motif DE_48h DE_48h-ZNF140_MA1589.2 19 bp overlap
Motif DE_60h DE_60h-ZNF140_MA1589.2 19 bp overlap
ZNF629 1 dataset
ChIP Hep-G2 ENCSR363ASY.ZNF629.Hep-G2 139 bp overlap
ZNF675 2 datasets
Motif DE_48h DE_48h-ZNF675_MA1714.2 19 bp overlap
Motif DE_60h DE_60h-ZNF675_MA1714.2 19 bp overlap
ZSCAN16 2 datasets
Motif DE_48h DE_48h-ZSCAN16_MA2100.1 18 bp overlap
Motif DE_60h DE_60h-ZSCAN16_MA2100.1 18 bp overlap
Zfp335 1 dataset
Motif DE_60h DE_60h-Zfp335_MA2002.2 7 bp overlap
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