Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

42 transcription factors

BCOR 2 datasets

ChIP WA01_RNF2-R GSE104690.BCOR.WA01_RNF2-R 189 bp overlap

ChIP WA01_RNF2-R_Doxycyclin GSE104690.BCOR.WA01_RNF2-R_Doxycyclin 156 bp overlap

CHD7 1 dataset

ChIP hiPSC_derived_lt-NES GSE108506.CHD7.hiPSC_derived_lt-NES 208 bp overlap

EBF1 2 datasets

Motif DE_12h DE_12h-EBF1_MA0154.5 11 bp overlap

Motif DE_36h DE_36h-EBF1_MA0154.5 11 bp overlap

EOMES 1 dataset

ChIP hESC GSE26097.EOMES.hESC 172 bp overlap

Ebf4 2 datasets

Motif DE_12h DE_12h-Ebf4_MA2122.1 11 bp overlap

Motif DE_36h DE_36h-Ebf4_MA2122.1 11 bp overlap

Elf5 1 dataset

Motif DE_12h DE_12h-Elf5_MA0136.4 8 bp overlap

FOXO1-PAX3 1 dataset

ChIP RH4_DMSO-6H GSE116344.FOXO1-PAX3.RH4_DMSO-6H 154 bp overlap

GABPA 1 dataset

Motif DE_12h DE_12h-GABPA_MA0062.4 10 bp overlap

GATA4 1 dataset

ChIP DE DE-GATA4-2 218 bp overlap

GATA6 8 datasets

ChIP DE DE-GATA6-1 206 bp overlap

ChIP DE DE-GATA6-2 218 bp overlap

ChIP DE_D1 S09-DE-d1-GATA6-exp1 218 bp overlap

ChIP DE_D1 S14-DE-d1-GATA6-exp1 218 bp overlap

ChIP DE_D1 S41-DE-d1-GATA6-exp2 218 bp overlap

ChIP DE_D2 S55-DE-d2-GATA6-exp2 218 bp overlap

ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 218 bp overlap

ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 218 bp overlap

IKZF2 1 dataset

Motif DE_12h DE_12h-IKZF2_MA2326.1 6 bp overlap

JUN 1 dataset

ChIP 786-O GSE86092.JUN.786-O 172 bp overlap

NANOG 6 datasets

ChIP WA01 ERP004238.NANOG.WA01 218 bp overlap

ChIP WA01 ENCSR000BMT.NANOG.WA01 144 bp overlap

ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 218 bp overlap

ChIP WA09 GSE105028.NANOG.WA09 218 bp overlap

ChIP WA09_heat-shock GSE105028.NANOG.WA09_heat-shock 208 bp overlap

ChIP hESC GSE18292.NANOG.hESC 93 bp overlap

NKX2-2 1 dataset

Motif DE_12h DE_12h-NKX2-2_MA1645.2 8 bp overlap

NKX2-5 1 dataset

Motif DE_12h DE_12h-NKX2-5_MA0063.3 7 bp overlap

PBX3 1 dataset

Motif DE_12h DE_12h-PBX3_MA1114.2 11 bp overlap

RAD21 1 dataset

ChIP H1 ENCFF698EWO 211 bp overlap

RBPJ 2 datasets

Motif DE_12h DE_12h-RBPJ_MA1116.2 6 bp overlap

Motif DE_36h DE_36h-RBPJ_MA1116.2 6 bp overlap

SMAD2 4 datasets

ChIP endoderm GSE29422.SMAD2.endoderm 176 bp overlap

ChIP hESC GSE29422.SMAD2.hESC 189 bp overlap

ChIP hESC_YAP-_activinA_15h GSE99202.SMAD2.hESC_YAP-_activinA_15h 218 bp overlap

ChIP hESC_activinA_15h GSE99202.SMAD2.hESC_activinA_15h 218 bp overlap

SMAD2-3 3 datasets

ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 218 bp overlap

ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 218 bp overlap

ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 218 bp overlap

SMAD2_3 6 datasets

ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 218 bp overlap

ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 218 bp overlap

ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 218 bp overlap

ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 218 bp overlap

ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 218 bp overlap

ChIP ESC S33-ESC-d0-SMAD2_3-exp2 218 bp overlap

SMAD3 3 datasets

ChIP BG03_DIFF_48H GSE36578.SMAD3.BG03_DIFF_48H 150 bp overlap

ChIP endoderm GSE29422.SMAD3.endoderm 165 bp overlap

ChIP hESC GSE29422.SMAD3.hESC 156 bp overlap

SMAD4 2 datasets

ChIP endoderm GSE29422.SMAD4.endoderm 172 bp overlap

ChIP hESC GSE29422.SMAD4.hESC 166 bp overlap

SMARCA4 2 datasets

ChIP hiPSC GSE124903.SMARCA4.hiPSC 212 bp overlap

ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 172 bp overlap

SMARCB1 1 dataset

ChIP hiPSC GSE124903.SMARCB1.hiPSC 191 bp overlap

SMARCC1 2 datasets

ChIP DE_D1 S15-DE-d1-BAF155-exp1 218 bp overlap

ChIP hiPSC GSE124903.SMARCC1.hiPSC 180 bp overlap

SPIB 1 dataset

Motif DE_12h DE_12h-SPIB_MA0081.3 13 bp overlap

Spi1 1 dataset

Motif DE_12h DE_12h-Spi1_MA0080.7 13 bp overlap

Stat5a::Stat5b 2 datasets

Motif DE_12h DE_12h-Stat5aStat5b_MA0519.2 9 bp overlap

Motif DE_36h DE_36h-Stat5aStat5b_MA0519.2 9 bp overlap

Stat5b 2 datasets

Motif DE_12h DE_12h-Stat5b_MA1625.2 9 bp overlap

Motif DE_36h DE_36h-Stat5b_MA1625.2 9 bp overlap

ZIC1 2 datasets

Motif DE_12h DE_12h-ZIC1_MA0696.1 14 bp overlap

Motif DE_36h DE_36h-ZIC1_MA0696.1 14 bp overlap

ZIC4 2 datasets

Motif DE_12h DE_12h-ZIC4_MA0751.2 14 bp overlap

Motif DE_36h DE_36h-ZIC4_MA0751.2 14 bp overlap

ZIC5 2 datasets

Motif DE_12h DE_12h-ZIC5_MA1584.2 15 bp overlap

Motif DE_36h DE_36h-ZIC5_MA1584.2 15 bp overlap

ZKSCAN5 1 dataset

Motif DE_12h DE_12h-ZKSCAN5_MA1652.2 9 bp overlap

ZNF418 2 datasets

Motif DE_12h DE_12h-ZNF418_MA1980.1 15 bp overlap

Motif DE_36h DE_36h-ZNF418_MA1980.1 15 bp overlap

ZNF454 1 dataset

Motif DE_12h DE_12h-ZNF454_MA1712.2 17 bp overlap

ZNF462 1 dataset

ChIP GM23338 ENCSR334UWP.ZNF462.GM23338 137 bp overlap

ZNF701 1 dataset

Motif DE_12h DE_12h-ZNF701_MA1987.2 17 bp overlap

ZNF768 2 datasets

Motif DE_12h DE_12h-ZNF768_MA1731.2 9 bp overlap

Motif DE_36h DE_36h-ZNF768_MA1731.2 9 bp overlap

Zic1::Zic2 2 datasets

Motif DE_12h DE_12h-Zic1Zic2_MA1628.2 7 bp overlap

Motif DE_36h DE_36h-Zic1Zic2_MA1628.2 7 bp overlap

Zic2 2 datasets

Motif DE_12h DE_12h-Zic2_MA1629.2 9 bp overlap

Motif DE_36h DE_36h-Zic2_MA1629.2 9 bp overlap

Zic3 2 datasets

Motif DE_12h DE_12h-Zic3_MA0697.3 7 bp overlap

Motif DE_36h DE_36h-Zic3_MA0697.3 7 bp overlap

Genome Browser