chr7 : 28,173,595 28,173,872
277 bp 19 TFs 2 linked genes
This 277 bp open chromatin element is linked to JAZF1-AS1 and JAZF1 and is bound by 19 transcription factors.
Linked Genes
2 genes
Gene Expression Dist. to TSS Distance Link type
JAZF1-AS1 6.6 kb Proximal Proximity
JAZF1 6.7 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr7:28,168,595 – 28,178,872
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
19 transcription factors
Source
Cell type
BRD4 1 dataset
ChIP CLL_patient1_4h_CpG GSE109411.BRD4.CLL_patient1_4h_CpG 194 bp overlap
CDK6 1 dataset
ChIP KB_IL GSE52469.CDK6.KB_IL 100 bp overlap
CHD7 1 dataset
ChIP hiPSC_derived_lt-NES GSE108506.CHD7.hiPSC_derived_lt-NES 241 bp overlap
CTBP2 1 dataset
ChIP WA01 ENCSR000EUO.CTBP2.WA01 256 bp overlap
GATA4 1 dataset
ChIP DE DE-GATA4-2 277 bp overlap
GATA6 5 datasets
ChIP DE DE-GATA6-1 242 bp overlap
ChIP DE DE-GATA6-2 277 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 277 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 261 bp overlap
ChIP foregut GSE117136.GATA6.foregut 260 bp overlap
HIF1A 1 dataset
ChIP U2OS_trough_DMOG GSE85096.HIF1A.U2OS_trough_DMOG 230 bp overlap
NR3C1 1 dataset
ChIP A-549 ENCSR000BJR.NR3C1.A-549 104 bp overlap
PRDM14 1 dataset
ChIP NCCIT GSE71675.PRDM14.NCCIT 238 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 277 bp overlap
SMAD2_3 2 datasets
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 277 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 257 bp overlap
SMARCA4 4 datasets
ChIP 501-mel_SHCTR GSE61965.SMARCA4.501-mel_SHCTR 100 bp overlap
ChIP 501-mel_SHMITF GSE61965.SMARCA4.501-mel_SHMITF 111 bp overlap
ChIP NPC_siSOX GSE122631.SMARCA4.NPC_siSOX 207 bp overlap
ChIP NSC GSE125033.SMARCA4.NSC 277 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 205 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 273 bp overlap
SOX2 2 datasets
ChIP HNSC GSE69479.SOX2.HNSC 277 bp overlap
ChIP NPC GSE122631.SOX2.NPC 177 bp overlap
YY1 1 dataset
ChIP WA01 ENCSR000BKD.YY1.WA01 198 bp overlap
ZNF362 2 datasets
ChIP HEK293 ENCFF436CGE 175 bp overlap
ChIP HEK293 ENCSR715QNO.ZNF362.HEK293 73 bp overlap
ZNF532 1 dataset
ChIP NMC24335 GSE96775.ZNF532.NMC24335 202 bp overlap