chr7 : 25,954,339 25,954,635
296 bp 24 TFs 3 linked genes
This 296 bp open chromatin element is linked to ENSG00000288962, ENSG00000270933, and MIR148A and is bound by 24 transcription factors.
Linked Genes
3 genes
Gene Expression Dist. to TSS Distance Link type
ENSG00000288962 2.8 kb Proximal Proximity
ENSG00000270933 3.5 kb Proximal Proximity
MIR148A 4.4 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr7:25,949,339 – 25,959,635
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
24 transcription factors
Source
Cell type
ATF2 1 dataset
ChIP WA01 ENCSR000BQU.ATF2.WA01 90 bp overlap
CREB1 2 datasets
ChIP GM23338 ENCSR214ZAV.CREB1.GM23338 296 bp overlap
ChIP WA01 ENCSR000BSN.CREB1.WA01 107 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 296 bp overlap
ChIP DE DE-FOXA2-2 296 bp overlap
GABPA 1 dataset
ChIP K562 ENCFF139LXS 105 bp overlap
GATA4 3 datasets
ChIP DE DE-GATA4-1 296 bp overlap
ChIP DE DE-GATA4-2 296 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 259 bp overlap
GATA6 3 datasets
ChIP DE DE-GATA6-1 296 bp overlap
ChIP DE DE-GATA6-2 296 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 296 bp overlap
JUN 6 datasets
ChIP DE_D1 S08-DE-d1-JUN-exp1 135 bp overlap
ChIP DE_D1 S40-DE-d1-JUN-exp2 244 bp overlap
ChIP DE_D2 S02-DE-d2-JUN-exp1 296 bp overlap
ChIP DE_D2 S54-DE-d2-JUN-exp2 296 bp overlap
ChIP ESC S34-ESC-d0-JUN-exp2 180 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 271 bp overlap
KDM1A 3 datasets
ChIP H1 ENCFF696SGD 124 bp overlap
ChIP SET-2_GSK GSE121424.KDM1A.SET-2_GSK 93 bp overlap
ChIP pancreatic-progenitor_GT GSE104840.KDM1A.pancreatic-progenitor_GT 175 bp overlap
NANOG 9 datasets
ChIP GM23338 ENCFF065NZG 254 bp overlap
ChIP GM23338 ENCSR061DGF.NANOG.GM23338 171 bp overlap
ChIP HUES-8 GSE109524.NANOG.HUES-8 249 bp overlap
ChIP WA01 ERP004238.NANOG.WA01 171 bp overlap
ChIP WA01 ENCSR000BMT.NANOG.WA01 152 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 183 bp overlap
ChIP WA09 GSE105028.NANOG.WA09 296 bp overlap
ChIP WA09_heat-shock GSE105028.NANOG.WA09_heat-shock 296 bp overlap
ChIP hESC GSE18292.NANOG.hESC 98 bp overlap
OTX2 1 dataset
ChIP WTC11 ENCFF634NAO 245 bp overlap
POU5F1 1 dataset
ChIP hESC_PRIMED GSE69646.POU5F1.hESC_PRIMED 296 bp overlap
SETDB1 2 datasets
ChIP HEK293 ENCSR348AGV.SETDB1.HEK293 86 bp overlap
ChIP U2OS ENCSR000EYD.SETDB1.U2OS 85 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 246 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 228 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 291 bp overlap
SOX2 2 datasets
ChIP hESC GSE18292.SOX2.hESC 104 bp overlap
ChIP hiPSC GSE56567.SOX2.hiPSC 242 bp overlap
SP1 2 datasets
ChIP H1 ENCFF263FUH 210 bp overlap
ChIP WA01 ENCSR000BIR.SP1.WA01 140 bp overlap
TEAD1 4 datasets
ChIP HEK293_siE1A GSE130135.TEAD1.HEK293_siE1A 119 bp overlap
ChIP HUCCT1 GSE68296.TEAD1.HUCCT1 156 bp overlap
ChIP WTC11 ENCFF502QUV 288 bp overlap
ChIP keratinocyte GSE138727.TEAD1.keratinocyte 269 bp overlap
TEAD4 2 datasets
ChIP H1 ENCFF778PAX 131 bp overlap
ChIP SNU-216 GSE44416.TEAD4.SNU-216 206 bp overlap
TRIM28 1 dataset
ChIP hESC GSE115387.TRIM28.hESC 296 bp overlap
YY1 2 datasets
ChIP H1 ENCFF524BTL 219 bp overlap
ChIP WA01 ENCSR000BKD.YY1.WA01 142 bp overlap