chr6 : 135,854,104 135,854,663
559 bp 22 TFs 1 linked gene
This 559 bp open chromatin element is linked to PDE7B and is bound by 22 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
PDE7B 2.4 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr6:135,849,104 – 135,859,663
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
22 transcription factors
Source
Cell type
AR 1 dataset
ChIP LNCaP_androgen-N_hypoxia-N GSE114732.AR.LNCaP_androgen-N_hypoxia-N 181 bp overlap
BRD4 1 dataset
ChIP MDA-MB-231_JQ1-neg_S_3f GSE136151.BRD4.MDA-MB-231_JQ1-neg_S_3f 189 bp overlap
EZH2 1 dataset
ChIP DND41 ENCSR000ASW.EZH2.DND41 559 bp overlap
FOXA1 6 datasets
ChIP A-549 ENCSR000BPX.FOXA1.A-549 139 bp overlap
ChIP LNCaP GSE52725.FOXA1.LNCaP 237 bp overlap
ChIP LNCaP GSE64656.FOXA1.LNCaP 183 bp overlap
ChIP NCI-H3122 GSE39998.FOXA1.NCI-H3122 203 bp overlap
ChIP T-47D_CR3flp GSE99479.FOXA1.T-47D_CR3flp 192 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA1.pancreatic-progenitor_PP1 267 bp overlap
FOXA2 4 datasets
ChIP BJ1-hTERT_FOXA2_GATA4_Coexp GSE92491.FOXA2.BJ1-hTERT_FOXA2_GATA4_Coexp 258 bp overlap
ChIP BJ1-hTERT_MimoRelease GSE92491.FOXA2.BJ1-hTERT_MimoRelease 197 bp overlap
ChIP DE DE-FOXA2-1 559 bp overlap
ChIP DE DE-FOXA2-2 559 bp overlap
GATA4 5 datasets
ChIP BJ1-hTERT GSE92491.GATA4.BJ1-hTERT 293 bp overlap
ChIP DE DE-GATA4-1 559 bp overlap
ChIP DE DE-GATA4-2 559 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 445 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 459 bp overlap
GATA6 3 datasets
ChIP DE DE-GATA6-1 559 bp overlap
ChIP DE DE-GATA6-2 559 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA6.pancreatic-progenitor_PP1 372 bp overlap
JUN 1 dataset
ChIP HAEC_IL1b_4h GSE89970.JUN.HAEC_IL1b_4h 134 bp overlap
LHX2 1 dataset
ChIP retina_pigment GSE60024.LHX2.retina_pigment 236 bp overlap
OTX2 1 dataset
ChIP retina_pigment GSE60024.OTX2.retina_pigment 283 bp overlap
PRDM10 1 dataset
ChIP HEK293 ENCFF145WQQ 218 bp overlap
RELA 5 datasets
ChIP HAEC_TNFa_4h GSE89970.RELA.HAEC_TNFa_4h 195 bp overlap
ChIP aortic-endothelial-cell_IL1B_D13 GSE139377.RELA.aortic-endothelial-cell_IL1B_D13 184 bp overlap
ChIP aortic-endothelial-cell_IL1B_D14 GSE139377.RELA.aortic-endothelial-cell_IL1B_D14 204 bp overlap
ChIP aortic-endothelial-cell_IL1B_D38 GSE139377.RELA.aortic-endothelial-cell_IL1B_D38 159 bp overlap
ChIP aortic-endothelial-cell_IL1B_D7 GSE139377.RELA.aortic-endothelial-cell_IL1B_D7 257 bp overlap
RUNX1 1 dataset
ChIP SKH1 GSE87283.RUNX1.SKH1 100 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 254 bp overlap
SMARCA4 2 datasets
ChIP 501-mel_SHCTR GSE61965.SMARCA4.501-mel_SHCTR 247 bp overlap
ChIP NPC_K755R-siAP GSE122631.SMARCA4.NPC_K755R-siAP 207 bp overlap
SMARCC1 1 dataset
ChIP Aska-SS_shSSX GSE108025.SMARCC1.Aska-SS_shSSX 255 bp overlap
T 1 dataset
ChIP H9_MESODERM GSE60606.T.H9_MESODERM 183 bp overlap
TLE3 2 datasets
ChIP LNCaP GSE94682.TLE3.LNCaP 229 bp overlap
ChIP LNCaP_r1881 GSE94682.TLE3.LNCaP_r1881 197 bp overlap
YY1 1 dataset
ChIP RH4_DMSO-6H GSE116344.YY1.RH4_DMSO-6H 78 bp overlap