chr6 : 121,434,456 121,434,774
318 bp 29 TFs 1 linked gene
This 318 bp open chromatin element is linked to GJA1 and is bound by 29 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
GJA1 870 bp At TSS Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr6:121,429,456 – 121,439,774
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
29 transcription factors
Source
Cell type
AR 4 datasets
ChIP LNCaP GSE80256.AR.LNCaP 236 bp overlap
ChIP prostate GSE56288.AR.prostate 219 bp overlap
ChIP prostate_P27 GSE130408.AR.prostate_P27 223 bp overlap
ChIP prostate_P27_T GSE130408.AR.prostate_P27_T 149 bp overlap
BRD4 2 datasets
ChIP HCC1395 GSE63581.BRD4.HCC1395 269 bp overlap
ChIP SUM1315_DMSO GSE63581.BRD4.SUM1315_DMSO 312 bp overlap
CBFB 1 dataset
ChIP SaOS-2 GSE76937.CBFB.SaOS-2 208 bp overlap
CBX3 1 dataset
ChIP HCT116 ENCFF947BOL 287 bp overlap
CTCF 8 datasets
ChIP A-549 ENCSR000AUF.CTCF.A-549 93 bp overlap
ChIP A-549 ENCSR000AUE.CTCF.A-549 70 bp overlap
ChIP A673 ENCFF123WOM 58 bp overlap
ChIP HCT-116 GSE131606.CTCF.HCT-116 229 bp overlap
ChIP HCT116 ENCFF373YMA 79 bp overlap
ChIP Panc1 ENCFF056JQX 318 bp overlap
ChIP chondrocyte ENCFF134ORZ 77 bp overlap
ChIP endodermal cell ENCFF471YCZ 75 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF335XTP 318 bp overlap
FOXO1 1 dataset
ChIP primary-chondrocyte GSE144026.FOXO1.primary-chondrocyte 206 bp overlap
HOXB13 1 dataset
ChIP G-401 GSE65381.HOXB13.G-401 318 bp overlap
KDM1A 1 dataset
ChIP H1 ENCFF696SGD 228 bp overlap
KMT2A 1 dataset
ChIP RCH-ACV GSE83671.KMT2A.RCH-ACV 208 bp overlap
MED1 2 datasets
ChIP U-87MG GSE36354.MED1.U-87MG 301 bp overlap
ChIP hESC_PRIMED GSE69646.MED1.hESC_PRIMED 244 bp overlap
MYBL2 1 dataset
ChIP A-673 GSE119971.MYBL2.A-673 198 bp overlap
MYOD1 1 dataset
ChIP RD_shSNAI2 GSE137168.MYOD1.RD_shSNAI2 240 bp overlap
PHIP 2 datasets
ChIP HCT-116_MLL1-KO__ab833 GSE101646.PHIP.HCT-116_MLL1-KO__ab833 86 bp overlap
ChIP HCT-116_ab833 GSE101646.PHIP.HCT-116_ab833 210 bp overlap
POLR2A 1 dataset
ChIP prostate gland ENCFF881OMH 172 bp overlap
POU5F1 1 dataset
ChIP BJ_INDUCED GSE36570.POU5F1.BJ_INDUCED 173 bp overlap
RAD21 3 datasets
ChIP HCT-116 GSE131606.RAD21.HCT-116 310 bp overlap
ChIP IMR-90 ENCSR000EFJ.RAD21.IMR-90 161 bp overlap
ChIP MCF-7 ENCSR703TNG.RAD21.MCF-7 121 bp overlap
RNF2 1 dataset
ChIP SYO-1_shCt GSE139053.RNF2.SYO-1_shCt 165 bp overlap
SIN3A 1 dataset
ChIP PFSK-1 ENCFF218MAY 153 bp overlap
SMARCA4 1 dataset
ChIP BIN-67_lentivirus-SMARCA4-T910M GSE117734.SMARCA4.BIN-67_lentivirus-SMARCA4-T910M 318 bp overlap
SMC1 1 dataset
ChIP HCT-116 GSE131606.SMC1.HCT-116 88 bp overlap
SMC3 1 dataset
ChIP IMR-90 ENCSR000HPG.SMC3.IMR-90 143 bp overlap
SS18 1 dataset
ChIP Aska-SS_BAF47KO1 GSE108025.SS18.Aska-SS_BAF47KO1 84 bp overlap
TBP 1 dataset
ChIP hESC GSE122298.TBP.hESC 318 bp overlap
USF1 4 datasets
ChIP A-549 ENCSR000BJB.USF1.A-549 180 bp overlap
ChIP H1 ENCFF090WVU 241 bp overlap
ChIP SK-N-SH ENCSR000BMF.USF1.SK-N-SH 252 bp overlap
ChIP WA01 ENCSR000BIU.USF1.WA01 234 bp overlap
USF2 3 datasets
ChIP IMR-90 ENCFF438KUN 239 bp overlap
ChIP IMR-90 ENCSR513UQG.USF2.IMR-90 165 bp overlap
ChIP WTC11 ENCFF139JAW 318 bp overlap
ZNF573 1 dataset
ChIP HEK293T GSE78099.ZNF573.HEK293T 185 bp overlap
ZNF716 1 dataset
ChIP HEK293T GSE78099.ZNF716.HEK293T 218 bp overlap
ZNF736 1 dataset
ChIP HEK293T GSE78099.ZNF736.HEK293T 310 bp overlap