chr1 : 107,649,074 107,649,370
296 bp 31 TFs 0 linked genes
This 296 bp open chromatin element has no linked target genes and is bound by 31 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr1:107,644,074 – 107,654,370
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
31 transcription factors
Source
Cell type
AHR 1 dataset
ChIP MCF-7_TCDD_1d GSE90550.AHR.MCF-7_TCDD_1d 144 bp overlap
ARNT 3 datasets
ChIP RCC10 GSE101063.ARNT.RCC10 263 bp overlap
ChIP RCC4 GSE85352.ARNT.RCC4 204 bp overlap
ChIP SK-MEL-28 GSE85352.ARNT.SK-MEL-28 222 bp overlap
CDX2 2 datasets
ChIP LS180 GSE31939.CDX2.LS180 121 bp overlap
ChIP LS180_125 GSE31939.CDX2.LS180_125 168 bp overlap
CRX 2 datasets
ChIP retina_Hu20 GSE137311.CRX.retina_Hu20 217 bp overlap
ChIP retina_Hu6 GSE137311.CRX.retina_Hu6 291 bp overlap
CTCF 1 dataset
ChIP retina_Hu6 GSE137311.CTCF.retina_Hu6 215 bp overlap
DUX4 1 dataset
ChIP WA01 GSE94322.DUX4.WA01 243 bp overlap
EPAS1 1 dataset
ChIP 786-O GSE34871.EPAS1.786-O 184 bp overlap
FOSL1 1 dataset
ChIP BT-549 GSE46166.FOSL1.BT-549 211 bp overlap
FOXA1 2 datasets
ChIP breast-cancer_ENOB-2849 GSE128018.FOXA1.breast-cancer_ENOB-2849 132 bp overlap
ChIP primary-breast-cancer_B2_DSG GSE114737.FOXA1.primary-breast-cancer_B2_DSG 100 bp overlap
FOXA2 1 dataset
ChIP DE DE-FOXA2-2 187 bp overlap
GATA1 1 dataset
ChIP CD34_Day7_30min GSE104676.GATA1.CD34_Day7_30min 152 bp overlap
GATA4 1 dataset
ChIP DE DE-GATA4-2 247 bp overlap
HIF1A 2 datasets
ChIP 786-O GSE34871.HIF1A.786-O 274 bp overlap
ChIP RCC10 GSE101063.HIF1A.RCC10 261 bp overlap
JUN 1 dataset
ChIP BT-549 GSE46166.JUN.BT-549 181 bp overlap
MAFB 1 dataset
ChIP islet ERP004003.MAFB.islet 133 bp overlap
MED12 1 dataset
ChIP leiomyoma_PT886 GSE128230.MED12.leiomyoma_PT886 76 bp overlap
MEF2D 1 dataset
ChIP retina_Hu25 GSE137311.MEF2D.retina_Hu25 270 bp overlap
MTA2 1 dataset
ChIP GM12878 ENCSR293QAR.MTA2.GM12878 229 bp overlap
NEUROD1 2 datasets
ChIP D283-Med GSE92582.NEUROD1.D283-Med 223 bp overlap
ChIP D283-Med_shNEUROD1-1579 GSE92582.NEUROD1.D283-Med_shNEUROD1-1579 278 bp overlap
NFE2 1 dataset
ChIP ProEs GSE59087.NFE2.ProEs 100 bp overlap
NKX3-1 1 dataset
ChIP islet ERP004003.NKX3-1.islet 239 bp overlap
OTX2 1 dataset
ChIP retina_Hu7 GSE137311.OTX2.retina_Hu7 244 bp overlap
PGR 1 dataset
ChIP myometrium_NP1 GSE137550.PGR.myometrium_NP1 296 bp overlap
PHIP 1 dataset
ChIP HEK293_ab833 GSE101646.PHIP.HEK293_ab833 206 bp overlap
PSIP1 1 dataset
ChIP T-REx-293 GSE117155.PSIP1.T-REx-293 285 bp overlap
SNAI2 1 dataset
ChIP SMS-CTR_D48 GSE137168.SNAI2.SMS-CTR_D48 129 bp overlap
SS18 1 dataset
ChIP Aska-SS GSE108025.SS18.Aska-SS 218 bp overlap
TBX21 1 dataset
ChIP GM12878 ENCSR739IHN.TBX21.GM12878 290 bp overlap
TEAD4 1 dataset
ChIP MCF-7_BLRP_WT_Veh GSE125594.TEAD4.MCF-7_BLRP_WT_Veh 56 bp overlap
ZNF675 1 dataset
ChIP HEK293T GSE78099.ZNF675.HEK293T 91 bp overlap