chr5 : 141,795,082 141,795,688
606 bp 25 TFs 8 linked genes
This 606 bp open chromatin element is linked to 8 target genes and is bound by 25 transcription factors.
Linked Genes
8 genes
Gene Expression Dist. to TSS Distance Link type
PCDH1 83.1 kb Distal Multiome
ENSG00000287726 88.2 kb Distal Multiome
ARAP3 113.1 kb Distal Multiome
DELE1 128.5 kb Distal Multiome
HDAC3 158.5 kb Distal Multiome
RNF14 173.8 kb Distal Multiome
DIAPH1 176.4 kb Distal Multiome
GNPDA1 217.7 kb Distal Multiome
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr5:141,790,082 – 141,800,688
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
25 transcription factors
Source
Cell type
ASH2L 1 dataset
ChIP WA01 ENCSR850KIP.ASH2L.WA01 248 bp overlap
BRD4 2 datasets
ChIP Kelly_resistant GSE103030.BRD4.Kelly_resistant 293 bp overlap
ChIP MCF-10A ERP003925.BRD4.MCF-10A 265 bp overlap
CHD7 1 dataset
ChIP hiPSC_derived_lt-NES GSE108506.CHD7.hiPSC_derived_lt-NES 129 bp overlap
CTCF 1 dataset
ChIP Kelly_sensitive GSE103030.CTCF.Kelly_sensitive 66 bp overlap
ESR1 2 datasets
ChIP Ishikawa_DMSO_D538G_clone3 GSE132426.ESR1.Ishikawa_DMSO_D538G_clone3 260 bp overlap
ChIP T-47D_Y537S GSE148277.ESR1.T-47D_Y537S 286 bp overlap
EZH2 2 datasets
ChIP RH30_DMSO GSE85169.EZH2.RH30_DMSO 146 bp overlap
ChIP THP-1 GSE135024.EZH2.THP-1 208 bp overlap
FOXO1 1 dataset
ChIP CD34 GSE80773.FOXO1.CD34 59 bp overlap
GATA4 2 datasets
ChIP DE DE-GATA4-1 376 bp overlap
ChIP DE DE-GATA4-2 364 bp overlap
GATA6 6 datasets
ChIP DE DE-GATA6-1 377 bp overlap
ChIP DE DE-GATA6-2 395 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 286 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 268 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 347 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 397 bp overlap
GLIS3 1 dataset
ChIP H9_plus GSE109562.GLIS3.H9_plus 213 bp overlap
HCFC1R1 1 dataset
ChIP cartilage GSE100311.HCFC1R1.cartilage 319 bp overlap
JUN 2 datasets
ChIP MCF-7_abemaciclib GSE157385.JUN.MCF-7_abemaciclib 277 bp overlap
ChIP MDA-BoM-1833 GSE112444.JUN.MDA-BoM-1833 192 bp overlap
MED1 1 dataset
ChIP HCT-116_shLuc_thaps GSE121798.MED1.HCT-116_shLuc_thaps 435 bp overlap
POU5F1_M 1 dataset
ChIP DE_D1 DED1-OCT4-M_Batch_II 318 bp overlap
RYBP 1 dataset
ChIP WA01 GSE104690.RYBP.WA01 159 bp overlap
SMAD2 1 dataset
ChIP endoderm GSE29422.SMAD2.endoderm 163 bp overlap
SMAD2-3 2 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 606 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 442 bp overlap
SMAD2_3 3 datasets
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 298 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 417 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 574 bp overlap
SMAD4 1 dataset
ChIP endoderm GSE29422.SMAD4.endoderm 235 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 238 bp overlap
SOX2 1 dataset
ChIP HNSC GSE69479.SOX2.HNSC 121 bp overlap
TBL1X 1 dataset
ChIP HEK293T GSE35197.TBL1X.HEK293T 234 bp overlap
TP53 1 dataset
ChIP IMR-90_APO GSE53491.TP53.IMR-90_APO 142 bp overlap