DELE1
DAP3 binding cell death enhancer 1 | DELE, KIAA0141
DELE1 — as a Regulated Gene

TFs regulating DELE1 0 TFs

Transcription factors with Perturb-seq knockdown data for DELE1. The Binding column indicates whether any binding evidence exists for this TF–gene pair (ChIP-seq or motif footprint peaks). The Mean coef is the average Perturb-seq regression coefficient across active gRNAs (positive = DELE1 upregulated upon KD; negative = downregulated). The Outlier column indicates whether this gene is in the top or bottom 5% of all TF knockdown effects.

Data: Effect:
TF Mean coef Binding Outlier TF→Gene link

Elements linked to DELE1

Open chromatin peaks (ATAC-seq) in the genomic neighbourhood of DELE1, linked by TSS proximity or chromatin conformation (Multiome / HiCAR). Each element overlaps at least one TF ChIP-seq binding site — the TFs column shows how many distinct TFs bind that element.

Accessibility Element Dist. to TSS Link type TFs
chr5:141,636,256–141,638,491 287.0 kb Distal (>10kb) Multiome 852
chr5:141,650,837–141,651,870 272.4 kb Distal (>10kb) Multiome 438
chr5:141,680,751–141,681,516 242.9 kb Distal (>10kb) Multiome HiCAR 257
chr5:141,681,692–141,682,621 241.6 kb Distal (>10kb) Multiome HiCAR 554
chr5:141,692,108–141,692,560 231.6 kb Distal (>10kb) Multiome HiCAR 498
chr5:141,702,181–141,702,796 221.4 kb Distal (>10kb) Multiome HiCAR 351
chr5:141,795,082–141,795,688 128.5 kb Distal (>10kb) Multiome 25
chr5:141,811,578–141,812,181 112.0 kb Distal (>10kb) Multiome 243
chr5:141,816,277–141,817,287 107.0 kb Distal (>10kb) Multiome 210
chr5:141,838,853–141,839,539 84.6 kb Distal (>10kb) Multiome 185
chr5:141,845,184–141,846,305 78.1 kb Distal (>10kb) Multiome 188
chr5:141,848,609–141,851,214 74.5 kb Distal (>10kb) Multiome 892
chr5:141,858,059–141,858,606 65.6 kb Distal (>10kb) Multiome 80
chr5:141,875,925–141,877,406 47.6 kb Distal (>10kb) Multiome 506
chr5:141,877,575–141,879,487 45.4 kb Distal (>10kb) Multiome 693
chr5:141,914,201–141,914,615 9.2 kb Proximal (<10kb) 409
chr5:141,916,121–141,916,307 7.5 kb Proximal (<10kb) 48
chr5:141,923,268–141,924,400 66 bp At TSS Multiome 922
chr5:141,968,679–141,969,625 45.3 kb Distal (>10kb) Multiome 966
chr5:142,012,158–142,013,413 89.2 kb Distal (>10kb) Multiome 665
chr5:142,083,687–142,084,682 160.3 kb Distal (>10kb) Multiome 113
chr5:142,108,404–142,109,356 184.9 kb Distal (>10kb) Multiome 759
chr5:142,169,261–142,169,978 245.7 kb Distal (>10kb) Multiome 405
chr5:142,175,265–142,176,514 252.0 kb Distal (>10kb) Multiome 230

Genome Browser

Genomic view of the DELE1 locus showing ATAC-seq accessibility and RNA-seq expression across the ESC → DE time course, together with TF binding peaks and element-to-TSS loop connections.

chr5:141,626,256 – 142,186,514
Proximal 1 kb Distal 10 kb Multiome HiCAR ATAC-seq RNA-seq