chr5 : 125,377,095 125,377,488
393 bp 33 TFs 1 linked gene
This 393 bp open chromatin element is linked to ENSG00000250402 and is bound by 33 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
ENSG00000250402 at TSS At TSS Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr5:125,372,095 – 125,382,488
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
33 transcription factors
Source
Cell type
ATRX 1 dataset
ChIP metastatic-neuroblastoma_SKNFI GSE100148.ATRX.metastatic-neuroblastoma_SKNFI 318 bp overlap
BRD4 2 datasets
ChIP Kelly_resistant GSE103030.BRD4.Kelly_resistant 393 bp overlap
ChIP Kelly_resistant_JQ1 GSE103030.BRD4.Kelly_resistant_JQ1 393 bp overlap
CHD7 1 dataset
ChIP hiPSC_derived_lt-NES GSE108506.CHD7.hiPSC_derived_lt-NES 393 bp overlap
CTCFL 1 dataset
ChIP Kelly_resistant GSE103030.CTCFL.Kelly_resistant 133 bp overlap
DUX4 1 dataset
ChIP WA01 GSE94322.DUX4.WA01 231 bp overlap
FLI1 6 datasets
ChIP A-673 GSE99959.FLI1.A-673 284 bp overlap
ChIP A-673_1_KRAB_GFP GSE106914.FLI1.A-673_1_KRAB_GFP 352 bp overlap
ChIP A-673_2_KRAB_eSOX2_1 GSE106914.FLI1.A-673_2_KRAB_eSOX2_1 331 bp overlap
ChIP A-673_D11 GSE129155.FLI1.A-673_D11 228 bp overlap
ChIP A-673_D14 GSE129155.FLI1.A-673_D14 392 bp overlap
ChIP A-673_D17 GSE129155.FLI1.A-673_D17 377 bp overlap
GATA3 1 dataset
ChIP Kelly GSE94822.GATA3.Kelly 220 bp overlap
HAND2 2 datasets
ChIP Kelly GSE94822.HAND2.Kelly 223 bp overlap
ChIP SK-N-BE2-C GSE94822.HAND2.SK-N-BE2-C 295 bp overlap
ISL1 1 dataset
ChIP SK-N-BE2-C GSE94822.ISL1.SK-N-BE2-C 287 bp overlap
MEIS1 1 dataset
ChIP A-673 GSE109477.MEIS1.A-673 197 bp overlap
MRTFB 1 dataset
ChIP A-673-clone-Asp114 GSE92738.MRTFB.A-673-clone-Asp114 226 bp overlap
MYBL2 1 dataset
ChIP A-673 GSE119971.MYBL2.A-673 393 bp overlap
NANOG 3 datasets
ChIP HUES-8 GSE109524.NANOG.HUES-8 349 bp overlap
ChIP WA09 GSE105028.NANOG.WA09 311 bp overlap
ChIP WA09_heat-shock GSE105028.NANOG.WA09_heat-shock 221 bp overlap
NEUROG2 1 dataset
ChIP MRC-5_NFD_1DPT GSE75910.NEUROG2.MRC-5_NFD_1DPT 194 bp overlap
NUTM1 1 dataset
ChIP embryonic-kidney_induced GSE133122.NUTM1.embryonic-kidney_induced 361 bp overlap
PHIP 1 dataset
ChIP HEK293_ab833 GSE101646.PHIP.HEK293_ab833 393 bp overlap
PHOX2B 1 dataset
ChIP SK-N-BE2-C GSE94822.PHOX2B.SK-N-BE2-C 212 bp overlap
POU5F1 1 dataset
ChIP neuron_bipolar_doxy_4d ENCSR362VCG.POU5F1.neuron_bipolar_doxy_4d 201 bp overlap
PRDM6 1 dataset
ChIP HEK293 ENCSR892QHR.PRDM6.HEK293 280 bp overlap
PSIP1 1 dataset
ChIP T-REx-293 GSE117155.PSIP1.T-REx-293 247 bp overlap
RAD21 1 dataset
ChIP Ishikawa ENCSR000BTU.RAD21.Ishikawa 177 bp overlap
RARA 1 dataset
ChIP hiPSC_D4 GSE109172.RARA.hiPSC_D4 311 bp overlap
SMAD2 2 datasets
ChIP hESC_YAP-_activinA_15h GSE99202.SMAD2.hESC_YAP-_activinA_15h 360 bp overlap
ChIP hESC_activinA_15h GSE99202.SMAD2.hESC_activinA_15h 370 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 323 bp overlap
SMARCA2 1 dataset
ChIP NPC_K755R-siCT GSE122631.SMARCA2.NPC_K755R-siCT 268 bp overlap
SMARCA4 10 datasets
ChIP NGP_ARID1A-het GSE134626.SMARCA4.NGP_ARID1A-het 393 bp overlap
ChIP NPC_K755R-pos GSE122631.SMARCA4.NPC_K755R-pos 110 bp overlap
ChIP NPC_siCT GSE122631.SMARCA4.NPC_siCT 209 bp overlap
ChIP NPC_siSOX GSE122631.SMARCA4.NPC_siSOX 167 bp overlap
ChIP NSC GSE125033.SMARCA4.NSC 326 bp overlap
ChIP TTC-1240 GSE124903.SMARCA4.TTC-1240 393 bp overlap
ChIP TTC-1240_SMARCB1-FL GSE124903.SMARCA4.TTC-1240_SMARCB1-FL 393 bp overlap
ChIP TTC-1240_delC GSE124903.SMARCA4.TTC-1240_delC 393 bp overlap
ChIP TTC-1240_empty GSE124903.SMARCA4.TTC-1240_empty 393 bp overlap
ChIP hiPSC GSE124903.SMARCA4.hiPSC 188 bp overlap
SMARCB1 1 dataset
ChIP TTC-1240_R377H GSE124903.SMARCB1.TTC-1240_R377H 393 bp overlap
SMARCC1 5 datasets
ChIP TTC-1240 GSE124903.SMARCC1.TTC-1240 393 bp overlap
ChIP TTC-1240_R377H GSE124903.SMARCC1.TTC-1240_R377H 393 bp overlap
ChIP TTC-1240_SMARCB1-FL GSE124903.SMARCC1.TTC-1240_SMARCB1-FL 393 bp overlap
ChIP TTC-1240_delC GSE124903.SMARCC1.TTC-1240_delC 393 bp overlap
ChIP TTC-1240_empty GSE124903.SMARCC1.TTC-1240_empty 393 bp overlap
SMC1A-B 1 dataset
ChIP Kelly_shLUC-res GSE115248.SMC1A-B.Kelly_shLUC-res 354 bp overlap
ZBTB17 1 dataset
ChIP HEK293 ENCFF865LIO 267 bp overlap
ZEB1 1 dataset
ChIP neuron_bipolar_doxy_4d ENCSR418KUS.ZEB1.neuron_bipolar_doxy_4d 126 bp overlap