chr1 : 84,018,309 84,018,517
208 bp 26 TFs 1 linked gene
This 208 bp open chromatin element is linked to ENSG00000229486 and is bound by 26 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
ENSG00000229486 at TSS At TSS Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr1:84,013,309 – 84,023,517
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
26 transcription factors
Source
Cell type
AR 1 dataset
ChIP LNCaP GSE80256.AR.LNCaP 147 bp overlap
BRD4 1 dataset
ChIP HEK293_sgNT GSE129407.BRD4.HEK293_sgNT 208 bp overlap
COBLL1 1 dataset
ChIP LTAD_EtOH GSE94577.COBLL1.LTAD_EtOH 208 bp overlap
CTCF 28 datasets
ChIP GM23338 ENCFF772DML 51 bp overlap
ChIP H1 ENCFF414GZI 184 bp overlap
ChIP HCT-116 GSE131606.CTCF.HCT-116 179 bp overlap
ChIP HEC-1-B_WT GSE140868.CTCF.HEC-1-B_WT 118 bp overlap
ChIP HeLa-Kyoto_WAPL-depleted GSE102884.CTCF.HeLa-Kyoto_WAPL-depleted 171 bp overlap
ChIP HeLa-S3 ENCFF565UFR 161 bp overlap
ChIP HeLa-S3_shCtrl GSE137848.CTCF.HeLa-S3_shCtrl 143 bp overlap
ChIP K-562 GSE70764.CTCF.K-562 169 bp overlap
ChIP K-562_RF2-insertion GSE140868.CTCF.K-562_RF2-insertion 146 bp overlap
ChIP K-562_enCRISPRi-LK GSE132212.CTCF.K-562_enCRISPRi-LK 191 bp overlap
ChIP Kelly_resistant GSE103030.CTCF.Kelly_resistant 155 bp overlap
ChIP MCF-7 ENCFF198DQX 208 bp overlap
ChIP MCF-7 ENCFF494VXA 208 bp overlap
ChIP MCF-7 ENCSR000DMR.CTCF.MCF-7 164 bp overlap
ChIP MCF-7 ENCSR560BUE.CTCF.MCF-7 140 bp overlap
ChIP OVCAR-8 GSE70764.CTCF.OVCAR-8 144 bp overlap
ChIP PC-3 ENCSR359LOD.CTCF.PC-3 208 bp overlap
ChIP SK-N-AS GSE101295.CTCF.SK-N-AS 208 bp overlap
ChIP WA01 ENCSR000BNH.CTCF.WA01 144 bp overlap
ChIP WA01 ENCSR000DLK.CTCF.WA01 137 bp overlap
ChIP ascending-aorta ENCSR846JKO.CTCF.ascending-aorta 96 bp overlap
ChIP hiPSC_IB12 GSE106870.CTCF.hiPSC_IB12 178 bp overlap
ChIP hiPSC_IB7 GSE106870.CTCF.hiPSC_IB7 180 bp overlap
ChIP hiPSC_IV8 GSE106870.CTCF.hiPSC_IV8 208 bp overlap
ChIP hiPSC_failed-genome-editing GSE106870.CTCF.hiPSC_failed-genome-editing 169 bp overlap
ChIP keratinocyte ENCFF046PBT 185 bp overlap
ChIP keratinocyte ENCFF291YDC 185 bp overlap
ChIP keratinocyte ENCSR000DNC.CTCF.keratinocyte 155 bp overlap
ERG 1 dataset
ChIP aortic-endothelial-cell_D16 GSE139377.ERG.aortic-endothelial-cell_D16 59 bp overlap
ESR1 1 dataset
ChIP Ishikawa_ETV4-KO2_Mili GSE129803.ESR1.Ishikawa_ETV4-KO2_Mili 155 bp overlap
EZH1 1 dataset
ChIP ProEs_SHCTR GSE59087.EZH1.ProEs_SHCTR 127 bp overlap
EZH2 1 dataset
ChIP prostate-cancer_shEZH2 GSE107780.EZH2.prostate-cancer_shEZH2 187 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 205 bp overlap
ChIP DE DE-FOXA2-2 208 bp overlap
GABPA 1 dataset
ChIP VCaP GSE49091.GABPA.VCaP 166 bp overlap
GATA4 2 datasets
ChIP DE DE-GATA4-1 191 bp overlap
ChIP DE DE-GATA4-2 157 bp overlap
GATA6 1 dataset
ChIP DE DE-GATA6-2 208 bp overlap
KDM5B 1 dataset
ChIP SUM185 GSE46055.KDM5B.SUM185 126 bp overlap
MAX 1 dataset
ChIP WA01 ENCSR000EUP.MAX.WA01 140 bp overlap
MYCN 1 dataset
ChIP SHEP-21N GSE80151.MYCN.SHEP-21N 169 bp overlap
PKNOX1 4 datasets
ChIP HEK293T ENCFF174WDB 208 bp overlap
ChIP HEK293T ENCSR233FAG.PKNOX1.HEK293T 125 bp overlap
ChIP K-562 ENCSR115SMW.PKNOX1.K-562 122 bp overlap
ChIP K562 ENCFF236IUS 208 bp overlap
RAD21 7 datasets
ChIP H1 ENCFF698EWO 208 bp overlap
ChIP H1 ENCFF967OJF 200 bp overlap
ChIP K-562_RF2-insertion GSE140868.RAD21.K-562_RF2-insertion 147 bp overlap
ChIP K562 ENCFF634XYR 208 bp overlap
ChIP MCF-7 ENCSR703TNG.RAD21.MCF-7 166 bp overlap
ChIP MCF-7 ENCSR000BTQ.RAD21.MCF-7 168 bp overlap
ChIP hiPSC_IV8 GSE106870.RAD21.hiPSC_IV8 208 bp overlap
RFX1 1 dataset
ChIP MCF-7 ENCSR066TET.RFX1.MCF-7 208 bp overlap
SIN3A 1 dataset
ChIP HUVEC-C GSE103245.SIN3A.HUVEC-C 147 bp overlap
SNAI2 1 dataset
ChIP SMS-CTR_T48 GSE137168.SNAI2.SMS-CTR_T48 132 bp overlap
SOX8 1 dataset
ChIP RH4 GSE116344.SOX8.RH4 208 bp overlap
STAG1 2 datasets
ChIP HeLa GSE126990.STAG1.HeLa 208 bp overlap
ChIP HeLa-Kyoto GSE138405.STAG1.HeLa-Kyoto 208 bp overlap
STAT3 1 dataset
ChIP monocyte_LPS GSE120943.STAT3.monocyte_LPS 85 bp overlap
ZNF143 1 dataset
ChIP FLP143HA_T4 GSE39263.ZNF143.FLP143HA_T4 153 bp overlap