chr4 : 146,182,539 146,182,779
240 bp 28 TFs 1 linked gene
This 240 bp open chromatin element is linked to LSM6 and is bound by 28 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
LSM6 6.8 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr4:146,177,539 – 146,187,779
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
28 transcription factors
Source
Cell type
ESRRG 1 dataset
ChIP cardiomyocyte GSE113760.ESRRG.cardiomyocyte 202 bp overlap
FEZF1 2 datasets
ChIP HEK293 ENCFF528YED 240 bp overlap
ChIP HEK293 ENCSR827NWO.FEZF1.HEK293 238 bp overlap
FOXA1 1 dataset
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA1.pancreatic-progenitor_PP1 225 bp overlap
FOXA2 4 datasets
ChIP CFPAC-1_HOXB8-OE GSE119930.FOXA2.CFPAC-1_HOXB8-OE 240 bp overlap
ChIP DE DE-FOXA2-1 240 bp overlap
ChIP DE DE-FOXA2-2 240 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA2.pancreatic-progenitor_PP1 240 bp overlap
GATA1 7 datasets
ChIP CD34_Day7_30min GSE104676.GATA1.CD34_Day7_30min 209 bp overlap
ChIP CD34_ERYTH_BMP GSE29194.GATA1.CD34_ERYTH_BMP 117 bp overlap
ChIP K-562 GSE107726.GATA1.K-562 164 bp overlap
ChIP erythroblast ENCFF867JAR 240 bp overlap
ChIP erythroblast ENCSR000EXP.GATA1.erythroblast 191 bp overlap
ChIP erythroid-progenitor_EPrec GSE124163.GATA1.erythroid-progenitor_EPrec 174 bp overlap
ChIP erythroid_Don001 GSE137982.GATA1.erythroid_Don001 214 bp overlap
GATA3 1 dataset
ChIP CLB-Ga GSE90683.GATA3.CLB-Ga 236 bp overlap
GATA4 10 datasets
ChIP BJ1-hTERT_FOXA2_GATA4_Coexp GSE92491.GATA4.BJ1-hTERT_FOXA2_GATA4_Coexp 201 bp overlap
ChIP DE DE-GATA4-1 240 bp overlap
ChIP G296S GSE85628.GATA4.G296S 240 bp overlap
ChIP G296S_2 GSE85628.GATA4.G296S_2 240 bp overlap
ChIP Hep-G2 GSE135714.GATA4.Hep-G2 240 bp overlap
ChIP cardiomyocyte GSE85628.GATA4.cardiomyocyte 186 bp overlap
ChIP cardiomyocyte_1 GSE85628.GATA4.cardiomyocyte_1 193 bp overlap
ChIP cardiomyocyte_5 GSE85628.GATA4.cardiomyocyte_5 240 bp overlap
ChIP cardiomyocyte_7 GSE85628.GATA4.cardiomyocyte_7 147 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 240 bp overlap
GATA6 7 datasets
ChIP AGS GSE51705.GATA6.AGS 167 bp overlap
ChIP DE DE-GATA6-1 240 bp overlap
ChIP DE DE-GATA6-2 240 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 217 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 113 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 240 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA6.pancreatic-progenitor_PP1 240 bp overlap
HAND2 1 dataset
ChIP CLB-Ga GSE90683.HAND2.CLB-Ga 240 bp overlap
HOXB8 1 dataset
ChIP CFPAC-1_HOXB8-OE GSE119930.HOXB8.CFPAC-1_HOXB8-OE 202 bp overlap
ISL1 1 dataset
ChIP SK-N-BE2-C GSE94822.ISL1.SK-N-BE2-C 183 bp overlap
KDM1A 2 datasets
ChIP NCI-H526_DMSO GSE66297.KDM1A.NCI-H526_DMSO 239 bp overlap
ChIP pancreatic-progenitor_PP2-KDM1A-inh GSE104840.KDM1A.pancreatic-progenitor_PP2-KDM1A-inh 218 bp overlap
OSR2 3 datasets
ChIP HEK293 ENCFF875BDB 149 bp overlap
ChIP HEK293 ENCSR324LTM.OSR2.HEK293 200 bp overlap
ChIP HEK293 GSE76494.OSR2.HEK293 147 bp overlap
PDX1 3 datasets
ChIP hESC GSE58685.PDX1.hESC 186 bp overlap
ChIP hiPSC GSE125768.PDX1.hiPSC 194 bp overlap
ChIP hiPSC_derived_PPs GSE106949.PDX1.hiPSC_derived_PPs 162 bp overlap
PHIP 1 dataset
ChIP HEK293_ab833 GSE101646.PHIP.HEK293_ab833 93 bp overlap
POLR2A 2 datasets
ChIP erythroblast ENCFF498VMR 240 bp overlap
ChIP stomach ENCFF607ZPU 222 bp overlap
POU2F3 1 dataset
ChIP NCI-H1048 GSE115123.POU2F3.NCI-H1048 239 bp overlap
RELA 2 datasets
ChIP HAEC_TNFa_4h GSE89970.RELA.HAEC_TNFa_4h 240 bp overlap
ChIP IMR-90_TNF GSE43070.RELA.IMR-90_TNF 163 bp overlap
TAL1 4 datasets
ChIP CD34 GSE52924.TAL1.CD34 195 bp overlap
ChIP K-562_enCRISPRi-LK GSE132212.TAL1.K-562_enCRISPRi-LK 142 bp overlap
ChIP ProEs GSE59087.TAL1.ProEs 151 bp overlap
ChIP erythroid GSE42390.TAL1.erythroid 178 bp overlap
TBX5 3 datasets
ChIP G296S GSE85628.TBX5.G296S 240 bp overlap
ChIP G296S_2 GSE85628.TBX5.G296S_2 240 bp overlap
ChIP hiPSC GSE81585.TBX5.hiPSC 170 bp overlap
WT1 1 dataset
ChIP HEK293 ENCSR966PJJ.WT1.HEK293 147 bp overlap
ZBTB44 2 datasets
ChIP HEK293 ENCFF560VPN 240 bp overlap
ChIP HEK293 ENCSR076STQ.ZBTB44.HEK293 201 bp overlap
ZNF143 1 dataset
ChIP FLP76_T4 GSE39263.ZNF143.FLP76_T4 171 bp overlap
ZNF2 1 dataset
ChIP HEK293 ENCSR011CKE.ZNF2.HEK293 220 bp overlap
ZNF24 1 dataset
ChIP GM12878 ENCSR072PWP.ZNF24.GM12878 170 bp overlap
ZNF736 1 dataset
ChIP HEK293T GSE78099.ZNF736.HEK293T 66 bp overlap