chr4 : 86,631,978 86,632,657
679 bp 37 TFs 0 linked genes
This 679 bp open chromatin element has no linked target genes and is bound by 37 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr4:86,626,978 – 86,637,657
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
37 transcription factors
Source
Cell type
AR 1 dataset
ChIP LNCaP ERP001226.AR.LNCaP 127 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF460KDD 251 bp overlap
DUX4 2 datasets
Motif DE_48h DE_48h-DUX4_MA0468.1 11 bp overlap
Motif DE_72h DE_72h-DUX4_MA0468.1 11 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 360 bp overlap
ERG 2 datasets
ChIP TSU-1621MT GSE60477.ERG.TSU-1621MT 476 bp overlap
ChIP TSU-1621MT_ATRA GSE60477.ERG.TSU-1621MT_ATRA 520 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 602 bp overlap
ChIP DE DE-FOXA2-2 534 bp overlap
GATA2 5 datasets
Motif DE_48h DE_48h-GATA2_MA0036.4 7 bp overlap
Motif DE_72h DE_72h-GATA2_MA0036.4 7 bp overlap
ChIP TF1 GSE73207.GATA2.TF1 403 bp overlap
ChIP TSU-1621MT GSE60477.GATA2.TSU-1621MT 317 bp overlap
ChIP WA09 GSE105081.GATA2.WA09 141 bp overlap
GATA3 2 datasets
ChIP MCF-7_E2 GSE81510.GATA3.MCF-7_E2 176 bp overlap
ChIP MCF-7_E2_Dex GSE81510.GATA3.MCF-7_E2_Dex 190 bp overlap
GATA4 8 datasets
ChIP DE DE-GATA4-1 577 bp overlap
ChIP DE DE-GATA4-2 663 bp overlap
Motif DE_48h DE_48h-GATA4_MA0482.3 8 bp overlap
Motif DE_72h DE_72h-GATA4_MA0482.3 8 bp overlap
ChIP Hep-G2 GSE135714.GATA4.Hep-G2 267 bp overlap
ChIP foregut GSE117136.GATA4.foregut 510 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 475 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 312 bp overlap
GATA6 16 datasets
ChIP DE DE-GATA6-1 606 bp overlap
ChIP DE DE-GATA6-2 634 bp overlap
Motif DE_48h DE_48h-GATA6_MA1104.3 8 bp overlap
Motif DE_72h DE_72h-GATA6_MA1104.3 8 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 477 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 631 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 261 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 613 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 679 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 504 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 528 bp overlap
ChIP foregut GSE117136.GATA6.foregut 509 bp overlap
ChIP foregut_KO GSE117136.GATA6.foregut_KO 463 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA6.pancreatic-progenitor 378 bp overlap
ChIP pancreatic-progenitor_KO GSE117136.GATA6.pancreatic-progenitor_KO 359 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA6.pancreatic-progenitor_PP1 232 bp overlap
Gata3 2 datasets
Motif DE_48h DE_48h-Gata3_MA0037.5 8 bp overlap
Motif DE_72h DE_72h-Gata3_MA0037.5 8 bp overlap
LMO2 1 dataset
ChIP TSU-1621MT GSE60477.LMO2.TSU-1621MT 496 bp overlap
LYL1 1 dataset
ChIP TSU-1621MT GSE60477.LYL1.TSU-1621MT 360 bp overlap
MEIS1 1 dataset
ChIP CHRF28811 ERR063469.MEIS1.CHRF28811 240 bp overlap
MYBL2 1 dataset
ChIP A-673 GSE119971.MYBL2.A-673 292 bp overlap
NEUROD1 2 datasets
ChIP D283-Med GSE92582.NEUROD1.D283-Med 397 bp overlap
ChIP D283-Med_shNEUROD1-1579 GSE92582.NEUROD1.D283-Med_shNEUROD1-1579 501 bp overlap
NFIC 2 datasets
Motif DE_48h DE_48h-NFIC_MA1527.2 15 bp overlap
Motif DE_72h DE_72h-NFIC_MA1527.2 15 bp overlap
NFIC::TLX1 2 datasets
Motif DE_48h DE_48h-NFICTLX1_MA0119.1 14 bp overlap
Motif DE_72h DE_72h-NFICTLX1_MA0119.1 14 bp overlap
PSIP1 1 dataset
ChIP T-REx-293 GSE117155.PSIP1.T-REx-293 224 bp overlap
RARA 1 dataset
Motif DE_48h DE_48h-RARA_MA0730.1 17 bp overlap
RELA 1 dataset
ChIP 786-M1A GSE98012.RELA.786-M1A 145 bp overlap
RNF2 1 dataset
ChIP ME-1_KD GSE128771.RNF2.ME-1_KD 404 bp overlap
RUNX1 2 datasets
ChIP ME-1_CBFB-MYH11-KD GSE117138.RUNX1.ME-1_CBFB-MYH11-KD 267 bp overlap
ChIP ME-1_Con GSE128771.RUNX1.ME-1_Con 267 bp overlap
Rarb 1 dataset
Motif DE_48h DE_48h-Rarb_MA0858.1 17 bp overlap
SMAD2 1 dataset
ChIP endoderm GSE29422.SMAD2.endoderm 145 bp overlap
SMAD2-3 2 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 447 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 281 bp overlap
SMAD2_3 3 datasets
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 252 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 414 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 382 bp overlap
SMAD3 1 dataset
ChIP endoderm GSE29422.SMAD3.endoderm 212 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 351 bp overlap
SPI1 1 dataset
ChIP Kasumi-1_SICTR GSE60130.SPI1.Kasumi-1_SICTR 148 bp overlap
T 1 dataset
ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 193 bp overlap
TAL1 4 datasets
ChIP CHRF28811 ERP008568.TAL1.CHRF28811 279 bp overlap
ChIP ProEs GSE59087.TAL1.ProEs 209 bp overlap
ChIP TSU-1621MT GSE60477.TAL1.TSU-1621MT 172 bp overlap
ChIP TSU-1621MT GSE60477.TAL1.TSU-1621MT 264 bp overlap
TFAP2A 1 dataset
ChIP WA09 GSE105081.TFAP2A.WA09 160 bp overlap
TRPS1 2 datasets
Motif DE_48h DE_48h-TRPS1_MA1970.2 8 bp overlap
Motif DE_72h DE_72h-TRPS1_MA1970.2 8 bp overlap
Wt1 2 datasets
Motif DE_48h DE_48h-Wt1_MA1627.2 10 bp overlap
Motif DE_72h DE_72h-Wt1_MA1627.2 10 bp overlap