chr4 : 36,641,838 36,642,011
173 bp 31 TFs 1 linked gene
This 173 bp open chromatin element is linked to LINC02505 and is bound by 31 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
LINC02505 at TSS At TSS Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr4:36,636,838 – 36,647,011
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
31 transcription factors
Source
Cell type
CXXC5 1 dataset
ChIP K562 ENCFF497CZN 173 bp overlap
E2F1 1 dataset
ChIP MCF-7 ENCSR000EWX.E2F1.MCF-7 159 bp overlap
E2F6 2 datasets
ChIP H1 ENCFF785DWK 173 bp overlap
ChIP K562 ENCFF136LTS 173 bp overlap
EGR1 2 datasets
Motif DE_12h DE_12h-EGR1_MA0162.5 10 bp overlap
ChIP K562 ENCFF895KGN 173 bp overlap
EGR2 1 dataset
Motif DE_12h DE_12h-EGR2_MA0472.2 11 bp overlap
EGR3 1 dataset
Motif DE_12h DE_12h-EGR3_MA0732.2 11 bp overlap
EGR4 1 dataset
Motif DE_12h DE_12h-EGR4_MA0733.2 11 bp overlap
EP400 1 dataset
ChIP K562 ENCFF850OZQ 173 bp overlap
KLF10 1 dataset
Motif DE_12h DE_12h-KLF10_MA1511.2 9 bp overlap
KLF12 1 dataset
Motif DE_12h DE_12h-KLF12_MA0742.2 9 bp overlap
KLF14 1 dataset
Motif DE_12h DE_12h-KLF14_MA0740.2 9 bp overlap
KLF16 1 dataset
Motif DE_12h DE_12h-KLF16_MA0741.1 11 bp overlap
KLF5 1 dataset
Motif DE_12h DE_12h-KLF5_MA0599.1 10 bp overlap
KLF7 1 dataset
Motif DE_12h DE_12h-KLF7_MA1959.2 8 bp overlap
NFRKB 2 datasets
ChIP K562 ENCFF057YFW 173 bp overlap
ChIP K562 ENCFF221WAF 77 bp overlap
OGG1 1 dataset
ChIP HEK293 GSE89017.OGG1.HEK293 173 bp overlap
POLR2A 1 dataset
ChIP K562 ENCFF215CWW 145 bp overlap
RBFOX2 3 datasets
ChIP K562 ENCFF196WTG 61 bp overlap
ChIP K562 ENCFF196WTG 173 bp overlap
ChIP K562 ENCFF967GRF 173 bp overlap
RXRB 1 dataset
Motif DE_12h DE_12h-RXRB_MA1555.1 14 bp overlap
RXRG 1 dataset
Motif DE_12h DE_12h-RXRG_MA1556.1 14 bp overlap
SP1 1 dataset
Motif DE_12h DE_12h-SP1_MA0079.5 9 bp overlap
SP2 1 dataset
Motif DE_12h DE_12h-SP2_MA0516.3 9 bp overlap
SP3 1 dataset
Motif DE_12h DE_12h-SP3_MA0746.3 11 bp overlap
SP4 1 dataset
Motif DE_12h DE_12h-SP4_MA0685.2 9 bp overlap
SP9 1 dataset
Motif DE_12h DE_12h-SP9_MA1564.2 10 bp overlap
SREBF2 1 dataset
Motif DE_12h DE_12h-SREBF2_MA0596.1 10 bp overlap
Wt1 1 dataset
Motif DE_12h DE_12h-Wt1_MA1627.2 10 bp overlap
YY1 1 dataset
ChIP K562 ENCFF660QRE 173 bp overlap
ZBTB48 1 dataset
ChIP U2OS_ZBTB48-KO GSE96776.ZBTB48.U2OS_ZBTB48-KO 173 bp overlap
ZNF281 1 dataset
Motif DE_12h DE_12h-ZNF281_MA1630.3 10 bp overlap