chr4 : 22,784,845 22,785,265
420 bp 64 TFs 0 linked genes
This 420 bp open chromatin element has no linked target genes and is bound by 64 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr4:22,779,845 – 22,790,265
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
64 transcription factors
Source
Cell type
Arx 1 dataset
Motif DE_12h DE_12h-Arx_MA0874.2 10 bp overlap
BARX1 1 dataset
Motif DE_12h DE_12h-BARX1_MA0875.2 6 bp overlap
BSX 1 dataset
Motif DE_12h DE_12h-BSX_MA0876.2 6 bp overlap
Bcl11B 1 dataset
Motif DE_12h DE_12h-Bcl11B_MA1989.2 9 bp overlap
CTNNB1 1 dataset
ChIP hiPSC_D2 GSE132532.CTNNB1.hiPSC_D2 329 bp overlap
DLX1 1 dataset
Motif DE_12h DE_12h-DLX1_MA0879.3 6 bp overlap
DLX6 1 dataset
Motif DE_12h DE_12h-DLX6_MA0882.2 6 bp overlap
Dlx2 1 dataset
Motif DE_12h DE_12h-Dlx2_MA0885.3 8 bp overlap
Dlx3 1 dataset
Motif DE_12h DE_12h-Dlx3_MA0880.2 6 bp overlap
Dlx4 1 dataset
Motif DE_12h DE_12h-Dlx4_MA0881.2 6 bp overlap
Dlx5 1 dataset
Motif DE_12h DE_12h-Dlx5_MA1476.3 8 bp overlap
EN2 1 dataset
Motif DE_12h DE_12h-EN2_MA0642.3 7 bp overlap
ETV6 1 dataset
ChIP Reh_pCCL-ETV6-HA GSE102785.ETV6.Reh_pCCL-ETV6-HA 141 bp overlap
FEZF2 1 dataset
Motif DE_12h DE_12h-FEZF2_MA2341.1 8 bp overlap
GATA6 5 datasets
ChIP DE_D1 S09-DE-d1-GATA6-exp1 398 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 303 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 289 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 381 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 420 bp overlap
GBX1 1 dataset
Motif DE_12h DE_12h-GBX1_MA0889.2 7 bp overlap
GBX2 1 dataset
Motif DE_12h DE_12h-GBX2_MA0890.2 6 bp overlap
GRHL2 1 dataset
Motif DE_12h DE_12h-GRHL2_MA1105.3 8 bp overlap
Gfi1B 1 dataset
Motif DE_12h DE_12h-Gfi1B_MA0483.2 10 bp overlap
Gmeb1 1 dataset
Motif DE_12h DE_12h-Gmeb1_MA0615.2 6 bp overlap
HESX1 1 dataset
Motif DE_12h DE_12h-HESX1_MA0894.2 6 bp overlap
HOXA7 1 dataset
Motif DE_12h DE_12h-HOXA7_MA1498.3 6 bp overlap
Hnf1A 1 dataset
Motif DE_12h DE_12h-Hnf1A_MA1991.2 10 bp overlap
IRF3 1 dataset
Motif DE_12h DE_12h-IRF3_MA1418.2 17 bp overlap
Irf1 1 dataset
Motif DE_12h DE_12h-Irf1_MA0050.4 11 bp overlap
JUN 3 datasets
ChIP DE_D1 S08-DE-d1-JUN-exp1 224 bp overlap
ChIP DE_D1 S40-DE-d1-JUN-exp2 128 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 245 bp overlap
LBX1 1 dataset
Motif DE_12h DE_12h-LBX1_MA0618.2 7 bp overlap
LBX2 1 dataset
Motif DE_12h DE_12h-LBX2_MA0699.2 6 bp overlap
LHX2 1 dataset
Motif DE_12h DE_12h-LHX2_MA0700.3 6 bp overlap
LHX9 1 dataset
Motif DE_12h DE_12h-LHX9_MA0701.3 7 bp overlap
Lef1 1 dataset
Motif DE_12h DE_12h-Lef1_MA0768.3 8 bp overlap
Lhx1 1 dataset
Motif DE_12h DE_12h-Lhx1_MA1518.3 10 bp overlap
MSX1 1 dataset
Motif DE_12h DE_12h-MSX1_MA0666.3 6 bp overlap
MSX2 1 dataset
Motif DE_12h DE_12h-MSX2_MA0708.3 6 bp overlap
Msx3 1 dataset
Motif DE_12h DE_12h-Msx3_MA0709.2 6 bp overlap
NFATC3 1 dataset
Motif DE_12h DE_12h-NFATC3_MA0625.3 6 bp overlap
NKX2-3 1 dataset
Motif DE_12h DE_12h-NKX2-3_MA0672.2 8 bp overlap
NKX2-4 1 dataset
Motif DE_12h DE_12h-NKX2-4_MA2003.2 8 bp overlap
NKX2-8 1 dataset
Motif DE_12h DE_12h-NKX2-8_MA0673.2 8 bp overlap
NR5A1 1 dataset
Motif DE_12h DE_12h-NR5A1_MA1540.3 12 bp overlap
Nfatc1 1 dataset
Motif DE_12h DE_12h-Nfatc1_MA0624.3 6 bp overlap
Nfe2l2 1 dataset
Motif DE_12h DE_12h-Nfe2l2_MA0150.3 11 bp overlap
Nobox 1 dataset
Motif DE_12h DE_12h-Nobox_MA0125.2 6 bp overlap
PRDM9 1 dataset
Motif DE_12h DE_12h-PRDM9_MA1723.2 20 bp overlap
PRRX2 1 dataset
Motif DE_12h DE_12h-PRRX2_MA0075.4 7 bp overlap
RAX 1 dataset
Motif DE_12h DE_12h-RAX_MA0718.2 6 bp overlap
Rarg 1 dataset
Motif DE_12h DE_12h-Rarg_MA0860.1 17 bp overlap
SMAD2-3 2 datasets
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 350 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 370 bp overlap
SMAD2_3 3 datasets
ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 347 bp overlap
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 260 bp overlap
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 293 bp overlap
SMARCC1 1 dataset
ChIP DE_D1 S15-DE-d1-BAF155-exp1 221 bp overlap
SPIB 1 dataset
Motif DE_12h DE_12h-SPIB_MA0081.3 13 bp overlap
Spi1 2 datasets
Motif DE_12h DE_12h-Spi1_MA0080.7 13 bp overlap
Motif DE_12h DE_12h-Spi1_MA0080.7 13 bp overlap
Stat2 1 dataset
Motif DE_12h DE_12h-Stat2_MA1623.2 10 bp overlap
T 1 dataset
ChIP H9_MESODERM GSE60606.T.H9_MESODERM 233 bp overlap
TCF7 1 dataset
Motif DE_12h DE_12h-TCF7_MA0769.3 7 bp overlap
TCF7L1 1 dataset
Motif DE_12h DE_12h-TCF7L1_MA1421.1 12 bp overlap
TCF7L2 1 dataset
Motif DE_12h DE_12h-TCF7L2_MA0523.2 9 bp overlap
ZNF418 1 dataset
Motif DE_12h DE_12h-ZNF418_MA1980.1 15 bp overlap
ZNF75D 1 dataset
Motif DE_12h DE_12h-ZNF75D_MA1601.2 12 bp overlap
ZSCAN31 1 dataset
Motif DE_12h DE_12h-ZSCAN31_MA1722.2 18 bp overlap
Zfp809 1 dataset
Motif DE_12h DE_12h-Zfp809_MA2125.1 9 bp overlap