chr4 : 20,693,341 – 20,693,542
201 bp 36 TFs 1 linked gene
This 201 bp open chromatin element is linked to PACRGL and is bound by 36 transcription factors.
Linked Genes
1 gene
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
PACRGL 6.9 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr4:20,688,341 – 20,698,542
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
36 transcription factors
Source
Cell type
Ahr::Arnt 2 datasets
Motif DE_12h DE_12h-AhrArnt_MA0006.2 5 bp overlap
Motif ES_0h ES_0h-AhrArnt_MA0006.2 5 bp overlap
Ascl2 1 dataset
Motif DE_12h DE_12h-Ascl2_MA0816.1 10 bp overlap
BHLHE22 1 dataset
Motif DE_12h DE_12h-BHLHE22_MA1635.2 6 bp overlap
ETV5::FIGLA 1 dataset
Motif DE_12h DE_12h-ETV5FIGLA_MA1945.2 14 bp overlap
ETV5::FOXO1 1 dataset
Motif DE_12h DE_12h-ETV5FOXO1_MA1947.2 10 bp overlap
FERD3L 1 dataset
Motif DE_12h DE_12h-FERD3L_MA1485.1 14 bp overlap
FEZF2 1 dataset
Motif DE_12h DE_12h-FEZF2_MA2341.1 8 bp overlap
GABPB1 1 dataset
ChIP K562 ENCFF015GDS 201 bp overlap
L3MBTL2 1 dataset
ChIP K562 ENCFF320EQC 201 bp overlap
MEIS1 2 datasets
Motif DE_12h DE_12h-MEIS1_MA0498.3 5 bp overlap
Motif DE_12h DE_12h-MEIS1_MA0498.3 5 bp overlap
MEIS2 1 dataset
Motif DE_12h DE_12h-MEIS2_MA0774.1 8 bp overlap
MEIS3 1 dataset
Motif DE_12h DE_12h-MEIS3_MA0775.2 7 bp overlap
MGA 1 dataset
ChIP K562 ENCFF140CEX 201 bp overlap
MYOG 1 dataset
Motif DE_12h DE_12h-MYOG_MA0500.3 8 bp overlap
NFIB 2 datasets
Motif DE_12h DE_12h-NFIB_MA1643.2 17 bp overlap
Motif ES_0h ES_0h-NFIB_MA1643.2 17 bp overlap
NFIC 2 datasets
Motif DE_12h DE_12h-NFIC_MA1527.2 15 bp overlap
Motif ES_0h ES_0h-NFIC_MA1527.2 15 bp overlap
NFIC::TLX1 2 datasets
Motif DE_12h DE_12h-NFICTLX1_MA0119.1 14 bp overlap
Motif ES_0h ES_0h-NFICTLX1_MA0119.1 14 bp overlap
NHLH1 1 dataset
Motif DE_12h DE_12h-NHLH1_MA0048.3 9 bp overlap
NHLH2 1 dataset
Motif DE_12h DE_12h-NHLH2_MA1529.2 16 bp overlap
NRF1 1 dataset
ChIP K562 ENCFF689EWI 201 bp overlap
Neurod2 1 dataset
Motif DE_12h DE_12h-Neurod2_MA1993.2 6 bp overlap
OSR2 1 dataset
Motif DE_12h DE_12h-OSR2_MA1646.2 8 bp overlap
Olig2 1 dataset
Motif DE_12h DE_12h-Olig2_MA1997.2 6 bp overlap
PBX3 1 dataset
Motif DE_12h DE_12h-PBX3_MA1114.2 11 bp overlap
PKNOX1 2 datasets
Motif DE_12h DE_12h-PKNOX1_MA0782.3 10 bp overlap
ChIP K562 ENCFF236IUS 201 bp overlap
PRDM10 2 datasets
ChIP K-562 ENCSR120MPG.PRDM10.K-562 130 bp overlap
ChIP K562 ENCFF740YLK 84 bp overlap
RXRB 2 datasets
Motif DE_12h DE_12h-RXRB_MA1555.1 14 bp overlap
Motif ES_0h ES_0h-RXRB_MA1555.1 14 bp overlap
RXRG 2 datasets
Motif DE_12h DE_12h-RXRG_MA1556.1 14 bp overlap
Motif ES_0h ES_0h-RXRG_MA1556.1 14 bp overlap
SREBF2 2 datasets
Motif DE_12h DE_12h-SREBF2_MA0596.1 10 bp overlap
Motif ES_0h ES_0h-SREBF2_MA0596.1 10 bp overlap
TFAP4::ETV1 1 dataset
Motif DE_12h DE_12h-TFAP4ETV1_MA1966.2 13 bp overlap
Tcf12 1 dataset
Motif DE_12h DE_12h-Tcf12_MA0521.3 6 bp overlap
Twist2 1 dataset
Motif DE_12h DE_12h-Twist2_MA0633.3 6 bp overlap
ZNF135 2 datasets
Motif DE_12h DE_12h-ZNF135_MA1587.1 14 bp overlap
Motif ES_0h ES_0h-ZNF135_MA1587.1 14 bp overlap
ZNF213 1 dataset
Motif DE_12h DE_12h-ZNF213_MA2121.1 12 bp overlap
ZNF335 1 dataset
ChIP HEK293 ENCSR328SUD.ZNF335.HEK293 201 bp overlap
ZNF460 3 datasets
Motif DE_12h DE_12h-ZNF460_MA1596.1 16 bp overlap
Motif DE_12h DE_12h-ZNF460_MA1596.1 16 bp overlap
Motif ES_0h ES_0h-ZNF460_MA1596.1 16 bp overlap
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