chr3 : 178,664,049 178,664,425
376 bp 24 TFs 0 linked genes
This 376 bp open chromatin element has no linked target genes and is bound by 24 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr3:178,659,049 – 178,669,425
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
24 transcription factors
Source
Cell type
BAF155 1 dataset
ChIP VCaP_shARID1A GSE110655.BAF155.VCaP_shARID1A 298 bp overlap
DUX4 1 dataset
ChIP WA01 GSE94322.DUX4.WA01 235 bp overlap
EED 1 dataset
ChIP GM12878 ENCFF266FYW 50 bp overlap
ETV6 1 dataset
ChIP GM12878 ENCFF105ZMI 140 bp overlap
FOXA1 3 datasets
ChIP MCF-7_estrogen_ab2 GSE112969.FOXA1.MCF-7_estrogen_ab2 272 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA1.pancreatic-progenitor_PP1 266 bp overlap
ChIP prostate-cancer_PDX_189-3 GSE130408.FOXA1.prostate-cancer_PDX_189-3 54 bp overlap
FOXA2 3 datasets
ChIP DE DE-FOXA2-1 376 bp overlap
ChIP DE DE-FOXA2-2 376 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA2.pancreatic-progenitor_PP1 67 bp overlap
FOXM1 1 dataset
ChIP GM12878 ENCFF264DJE 158 bp overlap
GATA3 1 dataset
ChIP MCF-7 GSE122847.GATA3.MCF-7 213 bp overlap
GATA4 5 datasets
ChIP DE DE-GATA4-1 376 bp overlap
ChIP DE DE-GATA4-2 376 bp overlap
ChIP Hep-G2 GSE135714.GATA4.Hep-G2 322 bp overlap
ChIP foregut GSE117136.GATA4.foregut 326 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 240 bp overlap
GATA6 7 datasets
ChIP AGS GSE51705.GATA6.AGS 156 bp overlap
ChIP Caco-2_PROLIF GSE23436.GATA6.Caco-2_PROLIF 112 bp overlap
ChIP DE DE-GATA6-1 376 bp overlap
ChIP DE DE-GATA6-2 376 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 376 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 297 bp overlap
ChIP foregut GSE117136.GATA6.foregut 300 bp overlap
HOXB13 1 dataset
ChIP prostate-cancer_PDX_167 GSE130408.HOXB13.prostate-cancer_PDX_167 235 bp overlap
IKZF2 1 dataset
ChIP GM12878 ENCFF238LYK 76 bp overlap
ISL1 1 dataset
ChIP SK-N-SH ENCFF285GEQ 338 bp overlap
JUN 1 dataset
ChIP DE_D2 S02-DE-d2-JUN-exp1 319 bp overlap
MED1 3 datasets
ChIP G296S GSE85628.MED1.G296S 51 bp overlap
ChIP G296S_2 GSE85628.MED1.G296S_2 51 bp overlap
ChIP cardiomyocyte_5 GSE85628.MED1.cardiomyocyte_5 248 bp overlap
MTA3 1 dataset
ChIP GM12878 ENCFF681QPL 99 bp overlap
NFIC 2 datasets
ChIP GM12878 ENCFF259FWL 200 bp overlap
ChIP GM12878 ENCSR000BRN.NFIC.GM12878 295 bp overlap
PML 2 datasets
ChIP GM12878 ENCFF160JQZ 93 bp overlap
ChIP GM12878 ENCFF160JQZ 312 bp overlap
RAD21 1 dataset
ChIP HAP1 GSE152721.RAD21.HAP1 141 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 238 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 254 bp overlap
TBX5 2 datasets
ChIP G296S GSE85628.TBX5.G296S 103 bp overlap
ChIP G296S_2 GSE85628.TBX5.G296S_2 103 bp overlap
ZNF217 1 dataset
ChIP GM12878 ENCFF978IGL 136 bp overlap