chr1 : 67,126,225 – 67,126,349
124 bp 38 TFs 1 linked gene
This 124 bp open chromatin element is linked to C1orf141 and is bound by 38 transcription factors.
Linked Genes
1 gene
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
C1orf141 8.6 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr1:67,121,225 – 67,131,349
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
38 transcription factors
Source
Cell type
Ahr::Arnt 1 dataset
Motif DE_12h DE_12h-AhrArnt_MA0006.2 5 bp overlap
BRD2 2 datasets
ChIP SK-MEL-147 GSE94488.BRD2.SK-MEL-147 124 bp overlap
ChIP SK-MEL-147_JQ1 GSE94488.BRD2.SK-MEL-147_JQ1 69 bp overlap
CTCF 42 datasets
ChIP 22Rv1 ENCFF466OXN 124 bp overlap
ChIP A-549 ENCSR000AUF.CTCF.A-549 124 bp overlap
ChIP A-549 ENCSR000AUE.CTCF.A-549 58 bp overlap
ChIP A673 ENCFF123WOM 51 bp overlap
ChIP C4-2B ENCFF821XVN 124 bp overlap
ChIP DOHH2 ENCFF637WNW 74 bp overlap
ChIP GP5D GSE51234.CTCF.GP5D 124 bp overlap
ChIP HAP1_clone21_CTCF-TSS-CRISPR_1 GSE152721.CTCF.HAP1_clone21_CTCF-TSS-CRISPR_1 57 bp overlap
ChIP HAP1_clone21_CTCF-TSS-CRISPR_2 GSE152721.CTCF.HAP1_clone21_CTCF-TSS-CRISPR_2 124 bp overlap
ChIP HCT-116 GSE131606.CTCF.HCT-116 107 bp overlap
ChIP HFFc6 ENCFF005CJI 95 bp overlap
ChIP HeLa GSE126990.CTCF.HeLa 72 bp overlap
ChIP HeLa-Kyoto GSE138405.CTCF.HeLa-Kyoto 72 bp overlap
ChIP HeLa-Kyoto_WAPL_PDS-depleted GSE102884.CTCF.HeLa-Kyoto_WAPL_PDS-depleted 70 bp overlap
ChIP K-562 ENCSR000AKO.CTCF.K-562 76 bp overlap
ChIP K-562_MonoC GSE137216.CTCF.K-562_MonoC 124 bp overlap
ChIP K-562_RabbitC GSE137216.CTCF.K-562_RabbitC 89 bp overlap
ChIP K-562_enCRISPRi-KL GSE132212.CTCF.K-562_enCRISPRi-KL 78 bp overlap
ChIP LNCAP ENCFF700QXT 124 bp overlap
ChIP LNCaP-C4-2B ENCSR460LGH.CTCF.LNCaP-C4-2B 109 bp overlap
ChIP Loucy ENCFF359TVQ 70 bp overlap
ChIP OCI-LY7 ENCFF086AXQ 79 bp overlap
ChIP OCI-Ly7 ENCSR027HML.CTCF.OCI-Ly7 73 bp overlap
ChIP PC-3 ENCFF487TUI 60 bp overlap
ChIP PC-3 ENCSR359LOD.CTCF.PC-3 97 bp overlap
ChIP RWPE-2 ENCSR856JJB.CTCF.RWPE-2 96 bp overlap
ChIP RWPE2 ENCFF911IEE 96 bp overlap
ChIP RWPE2 ENCFF911IEE 96 bp overlap
ChIP THP-1_PMA_Dex-6h GSE103477.CTCF.THP-1_PMA_Dex-6h 89 bp overlap
ChIP THP-1_Pam3csk-000m-Flavo-000m GSE103477.CTCF.THP-1_Pam3csk-000m-Flavo-000m 59 bp overlap
ChIP THP-1_Pam3csk-025m-Flavo-000m GSE103477.CTCF.THP-1_Pam3csk-025m-Flavo-000m 115 bp overlap
ChIP THP-1_Pam3csk-360m-Flavo-240m GSE103477.CTCF.THP-1_Pam3csk-360m-Flavo-240m 124 bp overlap
ChIP THP-1_siCtrl-eGFP-Pam3csk-4h GSE103477.CTCF.THP-1_siCtrl-eGFP-Pam3csk-4h 55 bp overlap
ChIP THP-1_siNIPBL-NS1-Pam3csk-4h GSE103477.CTCF.THP-1_siNIPBL-NS1-Pam3csk-4h 124 bp overlap
ChIP chondrocyte ENCFF134ORZ 124 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF245PVD 64 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF282ONV 63 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF696ASB 63 bp overlap
ChIP epithelial cell of prostate ENCFF086GTI 51 bp overlap
ChIP keratinocyte GSE154221.CTCF.keratinocyte 124 bp overlap
ChIP leukemia_CEBPA-96h GSE142161.CTCF.leukemia_CEBPA-96h 58 bp overlap
ChIP prostate_epithelial ENCSR196HOM.CTCF.prostate_epithelial 124 bp overlap
EHF 1 dataset
ChIP RWPE-1 GSE114241.EHF.RWPE-1 124 bp overlap
ELF1 1 dataset
ChIP K-562 ENCSR000BMD.ELF1.K-562 108 bp overlap
EOMES 1 dataset
Motif DE_12h DE_12h-EOMES_MA0800.2 9 bp overlap
ERF::FOXI1 1 dataset
Motif DE_12h DE_12h-ERFFOXI1_MA1935.2 10 bp overlap
ERF::FOXO1 1 dataset
Motif DE_12h DE_12h-ERFFOXO1_MA1936.2 12 bp overlap
EVI1 1 dataset
ChIP SKH1 GSE87283.EVI1.SKH1 95 bp overlap
FLI1::FOXI1 1 dataset
Motif DE_12h DE_12h-FLI1FOXI1_MA1950.2 11 bp overlap
FOS 3 datasets
Motif DE_12h DE_12h-FOS_MA0476.2 8 bp overlap
ChIP MCF-10A ENCSR000DON.FOS.MCF-10A 124 bp overlap
ChIP endothelial_umbilical-vein ENCSR000EVU.FOS.endothelial_umbilical-vein 124 bp overlap
FOS::JUN 1 dataset
Motif DE_12h DE_12h-FOSJUN_MA0099.4 9 bp overlap
FOS::JUNB 1 dataset
Motif DE_12h DE_12h-FOSJUNB_MA1134.2 9 bp overlap
FOS::JUND 1 dataset
Motif DE_12h DE_12h-FOSJUND_MA1141.2 9 bp overlap
FOSB::JUNB 1 dataset
Motif DE_12h DE_12h-FOSBJUNB_MA1135.2 9 bp overlap
FOSL1 3 datasets
Motif DE_12h DE_12h-FOSL1_MA0477.3 9 bp overlap
ChIP K-562 ENCSR239ZLZ.FOSL1.K-562 124 bp overlap
ChIP K562 ENCFF455MKD 124 bp overlap
FOSL1::JUN 1 dataset
Motif DE_12h DE_12h-FOSL1JUN_MA1128.2 9 bp overlap
FOSL1::JUNB 1 dataset
Motif DE_12h DE_12h-FOSL1JUNB_MA1137.2 9 bp overlap
FOSL2::JUN 1 dataset
Motif DE_12h DE_12h-FOSL2JUN_MA1130.2 9 bp overlap
FOSL2::JUNB 1 dataset
Motif DE_12h DE_12h-FOSL2JUNB_MA1138.2 9 bp overlap
FOSL2::JUND 1 dataset
Motif DE_12h DE_12h-FOSL2JUND_MA1144.2 9 bp overlap
FOXO1::ELF1 1 dataset
Motif DE_12h DE_12h-FOXO1ELF1_MA1953.2 13 bp overlap
FOXO1::ELK1 1 dataset
Motif DE_12h DE_12h-FOXO1ELK1_MA1954.2 13 bp overlap
IKZF1 1 dataset
Motif DE_12h DE_12h-IKZF1_MA1508.2 8 bp overlap
JUN 1 dataset
ChIP endothelial_umbilical-vein ENCSR000EFA.JUN.endothelial_umbilical-vein 115 bp overlap
JUNB 2 datasets
Motif DE_12h DE_12h-JUNB_MA0490.3 9 bp overlap
ChIP MCF10A-Er-Src_EtOH GSE115597.JUNB.MCF10A-Er-Src_EtOH 123 bp overlap
JUND 1 dataset
Motif DE_12h DE_12h-JUND_MA0491.3 9 bp overlap
Jun 1 dataset
Motif DE_12h DE_12h-Jun_MA0489.3 8 bp overlap
KLF9 1 dataset
Motif DE_12h DE_12h-KLF9_MA1107.3 11 bp overlap
MED1 1 dataset
ChIP hMSC-TERT4_D3 GSE104537.MED1.hMSC-TERT4_D3 89 bp overlap
NR3C1 2 datasets
ChIP IMR-90 ERP007093.NR3C1.IMR-90 90 bp overlap
ChIP SUM159PT GSE152203.NR3C1.SUM159PT 124 bp overlap
SIN3A 1 dataset
ChIP SK-N-SH ENCSR000BPB.SIN3A.SK-N-SH 97 bp overlap
SMARCA4 2 datasets
ChIP 501-mel_SHSOX10 GSE61965.SMARCA4.501-mel_SHSOX10 75 bp overlap
ChIP K-562 ENCSR587OQL.SMARCA4.K-562 124 bp overlap
STAT3 1 dataset
ChIP MCF10A-Er-Src_TAM GSE115597.STAT3.MCF10A-Er-Src_TAM 118 bp overlap
TBX20 1 dataset
Motif DE_12h DE_12h-TBX20_MA0689.1 11 bp overlap
TP63 10 datasets
ChIP BxPC-3 GSE115461.TP63.BxPC-3 124 bp overlap
ChIP MCF-10A_Nutlin3A GSE111009.TP63.MCF-10A_Nutlin3A 124 bp overlap
ChIP SUIT-2 GSE115461.TP63.SUIT-2 124 bp overlap
ChIP keratinocyte GSE56674.TP63.keratinocyte 124 bp overlap
ChIP keratinocyte_CISP GSE56674.TP63.keratinocyte_CISP 124 bp overlap
ChIP keratinocyte_D0 GSE59824.TP63.keratinocyte_D0 124 bp overlap
ChIP keratinocyte_D2 GSE59824.TP63.keratinocyte_D2 124 bp overlap
ChIP keratinocyte_D4 GSE59824.TP63.keratinocyte_D4 124 bp overlap
ChIP keratinocyte_D7 GSE59824.TP63.keratinocyte_D7 124 bp overlap
ChIP keratinocyte_epidermal GSE67382.TP63.keratinocyte_epidermal 124 bp overlap
ZKSCAN1 1 dataset
ChIP K-562 ENCSR882ERE.ZKSCAN1.K-562 112 bp overlap
ZNF592 1 dataset
ChIP K562 ENCFF547OSS 124 bp overlap
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