chr3 : 153,854,809 153,855,267
458 bp 26 TFs 0 linked genes
This 458 bp open chromatin element has no linked target genes and is bound by 26 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr3:153,849,809 – 153,860,267
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
26 transcription factors
Source
Cell type
AR 1 dataset
ChIP LNCaP_SHGATA2_ETOH GSE69043.AR.LNCaP_SHGATA2_ETOH 153 bp overlap
BRD2 3 datasets
ChIP HCC1806_NTsiRNA GSE116879.BRD2.HCC1806_NTsiRNA 239 bp overlap
ChIP SUM159PT_DMSO GSE116879.BRD2.SUM159PT_DMSO 236 bp overlap
ChIP SUM159PT_MGSK2801 GSE116879.BRD2.SUM159PT_MGSK2801 52 bp overlap
BRD4 3 datasets
ChIP CHL-1 GSE95585.BRD4.CHL-1 244 bp overlap
ChIP SUM159PT_100nMtrametinib_72h GSE87418.BRD4.SUM159PT_100nMtrametinib_72h 145 bp overlap
ChIP SUM159PT_30nMbortezomib_8h GSE87418.BRD4.SUM159PT_30nMbortezomib_8h 55 bp overlap
CREB1 1 dataset
ChIP LNCaP-abl_SHFOXA1 GSE63034.CREB1.LNCaP-abl_SHFOXA1 364 bp overlap
DUX4 2 datasets
ChIP HEK293 GSE75791.DUX4.HEK293 133 bp overlap
ChIP WA01 GSE94322.DUX4.WA01 78 bp overlap
ERG 1 dataset
ChIP VCaP_shARID1A GSE110655.ERG.VCaP_shARID1A 193 bp overlap
ESR1 1 dataset
ChIP VCaP_E2 GSE43985.ESR1.VCaP_E2 64 bp overlap
FOXA1 3 datasets
ChIP HEK293_r261g_TFS GSE123618.FOXA1.HEK293_r261g_TFS 61 bp overlap
ChIP LAPC-4_TFS_p358fs-V5 GSE123618.FOXA1.LAPC-4_TFS_p358fs-V5 140 bp overlap
ChIP prostate_P5_T GSE130408.FOXA1.prostate_P5_T 147 bp overlap
FOXA2 3 datasets
ChIP BJ1-hTERT_FOXA2_GATA4_Coexp GSE92491.FOXA2.BJ1-hTERT_FOXA2_GATA4_Coexp 223 bp overlap
ChIP DE DE-FOXA2-1 270 bp overlap
ChIP DE DE-FOXA2-2 307 bp overlap
GATA2 6 datasets
ChIP LNCaP GSE38391.GATA2.LNCaP 227 bp overlap
ChIP LNCaP GSE52725.GATA2.LNCaP 227 bp overlap
ChIP LNCaP_CSFCS GSE69043.GATA2.LNCaP_CSFCS 264 bp overlap
ChIP LNCaP_FBS GSE69043.GATA2.LNCaP_FBS 218 bp overlap
ChIP VCaP GSE125236.GATA2.VCaP 185 bp overlap
ChIP VCaP_JQ1 GSE125236.GATA2.VCaP_JQ1 246 bp overlap
GATA4 4 datasets
ChIP DE DE-GATA4-1 372 bp overlap
ChIP DE DE-GATA4-2 455 bp overlap
ChIP foregut GSE117136.GATA4.foregut 298 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 269 bp overlap
GATA6 4 datasets
ChIP DE DE-GATA6-1 312 bp overlap
ChIP DE DE-GATA6-2 438 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 227 bp overlap
ChIP foregut GSE117136.GATA6.foregut 251 bp overlap
HDAC2 1 dataset
ChIP RH4_DMSO-6H GSE116344.HDAC2.RH4_DMSO-6H 205 bp overlap
HNRNPK 3 datasets
ChIP Hep-G2 GSE120104.HNRNPK.Hep-G2 84 bp overlap
ChIP HepG2 ENCFF493GNS 227 bp overlap
ChIP HepG2 ENCFF826MXP 224 bp overlap
HOXB13 8 datasets
ChIP LNCaP GSE56288.HOXB13.LNCaP 240 bp overlap
ChIP prostate-cancer_PDX_167 GSE130408.HOXB13.prostate-cancer_PDX_167 160 bp overlap
ChIP prostate-cancer_PDX_70 GSE130408.HOXB13.prostate-cancer_PDX_70 77 bp overlap
ChIP prostate-cancer_PDX_92 GSE130408.HOXB13.prostate-cancer_PDX_92 203 bp overlap
ChIP prostate_2480_T GSE130408.HOXB13.prostate_2480_T 243 bp overlap
ChIP prostate_2483_T GSE130408.HOXB13.prostate_2483_T 128 bp overlap
ChIP prostate_P13_T GSE130408.HOXB13.prostate_P13_T 154 bp overlap
ChIP prostate_P5_T GSE130408.HOXB13.prostate_P5_T 265 bp overlap
INO80 1 dataset
ChIP Huh-7 GSE97411.INO80.Huh-7 237 bp overlap
ONECUT1 1 dataset
ChIP pancreatic-progenitor_PP1 GSE104840.ONECUT1.pancreatic-progenitor_PP1 78 bp overlap
PCBP2 2 datasets
ChIP Hep-G2 ENCSR945NSF.PCBP2.Hep-G2 175 bp overlap
ChIP Hep-G2 GSE120104.PCBP2.Hep-G2 175 bp overlap
PHIP 1 dataset
ChIP HEK293_ab833 GSE101646.PHIP.HEK293_ab833 132 bp overlap
RNF2 1 dataset
ChIP SYO-1_shCt GSE139053.RNF2.SYO-1_shCt 61 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 254 bp overlap
SMARCA4 1 dataset
ChIP 501-mel_SHCTR GSE61965.SMARCA4.501-mel_SHCTR 336 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 200 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 220 bp overlap
YY1 1 dataset
ChIP WA01 ENCSR000BKD.YY1.WA01 134 bp overlap