chr3 : 82,980,928 82,981,547
619 bp 45 TFs 0 linked genes
This 619 bp open chromatin element has no linked target genes and is bound by 45 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr3:82,975,928 – 82,986,547
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
45 transcription factors
Source
Cell type
AR 1 dataset
ChIP LNCaP-abl GSE39459.AR.LNCaP-abl 117 bp overlap
ASCL1 1 dataset
Motif DE_36h DE_36h-ASCL1_MA1631.2 9 bp overlap
CTCF 1 dataset
Motif DE_36h DE_36h-CTCF_MA0139.2 15 bp overlap
DUX4 2 datasets
ChIP HEK293 GSE75791.DUX4.HEK293 359 bp overlap
ChIP WA01 GSE94322.DUX4.WA01 491 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 165 bp overlap
ESR1 1 dataset
ChIP MCF-7_SHFOXA1_E2 ERP000380.ESR1.MCF-7_SHFOXA1_E2 131 bp overlap
ESRRA 1 dataset
Motif DE_36h DE_36h-ESRRA_MA0592.4 9 bp overlap
FIGLA 1 dataset
Motif DE_36h DE_36h-FIGLA_MA0820.2 6 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 330 bp overlap
ChIP DE DE-FOXA2-2 340 bp overlap
GABPA 1 dataset
ChIP VCaP GSE49091.GABPA.VCaP 136 bp overlap
GATA4 2 datasets
ChIP DE DE-GATA4-1 410 bp overlap
ChIP DE DE-GATA4-2 544 bp overlap
GATA6 7 datasets
ChIP DE DE-GATA6-1 437 bp overlap
ChIP DE DE-GATA6-2 527 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 411 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 523 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 364 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 386 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 379 bp overlap
MAFK 1 dataset
ChIP HepG2 ENCFF743ZOF 101 bp overlap
MAX::MYC 1 dataset
Motif DE_36h DE_36h-MAXMYC_MA0059.2 10 bp overlap
MXI1 1 dataset
Motif DE_36h DE_36h-MXI1_MA1108.3 6 bp overlap
NHLH2 1 dataset
Motif DE_36h DE_36h-NHLH2_MA1529.2 16 bp overlap
NR5A1 1 dataset
Motif DE_36h DE_36h-NR5A1_MA1540.3 12 bp overlap
Nr5A2 1 dataset
Motif DE_36h DE_36h-Nr5A2_MA0505.3 9 bp overlap
PGR 1 dataset
Motif DE_36h DE_36h-PGR_MA2327.1 9 bp overlap
POU4F2 1 dataset
ChIP HNPC_DIF GSE74814.POU4F2.HNPC_DIF 132 bp overlap
Ptf1A 1 dataset
Motif DE_36h DE_36h-Ptf1A_MA1620.2 8 bp overlap
SNAI1 1 dataset
Motif DE_36h DE_36h-SNAI1_MA1558.2 7 bp overlap
SNAI3 1 dataset
Motif DE_36h DE_36h-SNAI3_MA1559.2 9 bp overlap
SOX10 1 dataset
Motif DE_36h DE_36h-SOX10_MA0442.3 6 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 279 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 243 bp overlap
SOX4 1 dataset
Motif DE_36h DE_36h-SOX4_MA0867.3 8 bp overlap
Sox11 1 dataset
Motif DE_36h DE_36h-Sox11_MA0869.3 8 bp overlap
TCF12 1 dataset
Motif DE_36h DE_36h-TCF12_MA1648.2 7 bp overlap
TCF3 1 dataset
Motif DE_36h DE_36h-TCF3_MA0522.4 7 bp overlap
TCF4 1 dataset
Motif DE_36h DE_36h-TCF4_MA0830.3 8 bp overlap
TEAD4 1 dataset
ChIP HEK293_siCtrl GSE130135.TEAD4.HEK293_siCtrl 256 bp overlap
YY1AP1 1 dataset
ChIP HEK293_siCtrl GSE130135.YY1AP1.HEK293_siCtrl 116 bp overlap
ZEB1 1 dataset
Motif DE_36h DE_36h-ZEB1_MA0103.4 6 bp overlap
ZIM3 1 dataset
ChIP HEK293T GSE78099.ZIM3.HEK293T 279 bp overlap
ZNF189 1 dataset
Motif DE_36h DE_36h-ZNF189_MA1725.2 9 bp overlap
ZNF423 1 dataset
ChIP WTC11 ENCFF574PBR 317 bp overlap
Zic3 1 dataset
Motif DE_36h DE_36h-Zic3_MA0697.3 7 bp overlap