chr3 : 75,341,560 75,342,019
459 bp 35 TFs 0 linked genes
This 459 bp open chromatin element has no linked target genes and is bound by 35 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr3:75,336,560 – 75,347,019
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
35 transcription factors
Source
Cell type
ASCL1 2 datasets
Motif DE_12h DE_12h-ASCL1_MA1631.2 9 bp overlap
Motif ES_0h ES_0h-ASCL1_MA1631.2 9 bp overlap
BACH1 1 dataset
ChIP H1 ENCFF282VDB 280 bp overlap
CTCF 74 datasets
ChIP AG04450 ENCFF116DJL 199 bp overlap
ChIP AG10803 ENCFF549AQK 178 bp overlap
ChIP BJ ENCFF434HEC 243 bp overlap
ChIP Caco-2 ENCFF934QYS 182 bp overlap
Motif DE_12h DE_12h-CTCF_MA0139.2 15 bp overlap
Motif ES_0h ES_0h-CTCF_MA0139.2 15 bp overlap
ChIP GM23338 ENCFF531QOI 194 bp overlap
ChIP GM23338 ENCFF772DML 216 bp overlap
ChIP H1 ENCFF230QSV 165 bp overlap
ChIP H1 ENCFF414GZI 198 bp overlap
ChIP H1 ENCFF764RHO 142 bp overlap
ChIP H9 ENCFF152GTF 295 bp overlap
ChIP HCT-116 ENCSR000BSE.CTCF.HCT-116 164 bp overlap
ChIP HCT116 ENCFF003KHP 305 bp overlap
ChIP HCT116 ENCFF373YMA 257 bp overlap
ChIP HFF-Myc ENCFF680WYR 292 bp overlap
ChIP HFFc6 ENCFF005CJI 324 bp overlap
ChIP HFFc6 ENCFF005CJI 123 bp overlap
ChIP HUES-64_DNMT-KO GSE97394.CTCF.HUES-64_DNMT-KO 233 bp overlap
ChIP Hep-G2 ENCSR000BIE.CTCF.Hep-G2 112 bp overlap
ChIP HepG2 ENCFF194VBQ 234 bp overlap
ChIP HepG2 ENCFF348BUL 175 bp overlap
ChIP HepG2 ENCFF757EKU 290 bp overlap
ChIP IMR-90 ENCFF887MRH 197 bp overlap
ChIP K-562_MonoC GSE137216.CTCF.K-562_MonoC 222 bp overlap
ChIP K-562_RabbitC GSE137216.CTCF.K-562_RabbitC 161 bp overlap
ChIP K562 ENCFF082GOI 179 bp overlap
ChIP K562 ENCFF111MGE 210 bp overlap
ChIP K562 ENCFF400DFR 177 bp overlap
ChIP LNCAP ENCFF700QXT 383 bp overlap
ChIP MCF-7 ENCFF162GNE 62 bp overlap
ChIP MCF-7 ENCFF198DQX 195 bp overlap
ChIP MCF-7 ENCFF414SZG 54 bp overlap
ChIP MCF-7 ENCFF494VXA 205 bp overlap
ChIP MCF-7 ENCFF844STM 63 bp overlap
ChIP MCF-7 ENCFF954TUV 199 bp overlap
ChIP MCF-7 ENCSR000DMR.CTCF.MCF-7 183 bp overlap
ChIP MCF-7 ENCSR000AHD.CTCF.MCF-7 154 bp overlap
ChIP MCF-7_E2 ERP000380.CTCF.MCF-7_E2 110 bp overlap
ChIP NB69 GSE101295.CTCF.NB69 285 bp overlap
ChIP OCI-LY1 ENCFF455ESK 326 bp overlap
ChIP OCI-LY1 ENCFF455ESK 125 bp overlap
ChIP OCI-LY3 ENCFF939BYJ 262 bp overlap
ChIP OCI-LY7 ENCFF086AXQ 276 bp overlap
ChIP OCI-Ly1 ENCSR072EUE.CTCF.OCI-Ly1 92 bp overlap
ChIP OCI-Ly3 ENCSR756ZKG.CTCF.OCI-Ly3 288 bp overlap
ChIP OVCAR-8 GSE70764.CTCF.OVCAR-8 86 bp overlap
ChIP PC-3 ENCFF487TUI 331 bp overlap
ChIP PC-3 ENCFF487TUI 131 bp overlap
ChIP PC-3 ENCSR359LOD.CTCF.PC-3 89 bp overlap
ChIP SU-DHL-6 ENCFF116KKR 347 bp overlap
ChIP SU-DHL-6 ENCFF116KKR 148 bp overlap
ChIP WA01 ENCSR000BNH.CTCF.WA01 199 bp overlap
ChIP WA01 ENCSR000DLK.CTCF.WA01 90 bp overlap
ChIP WA01_NEUR GSE52457.CTCF.WA01_NEUR 139 bp overlap
ChIP WERI-Rb-1 ENCFF349QKF 210 bp overlap
ChIP WERI-Rb-1 ENCSR000DXW.CTCF.WERI-Rb-1 199 bp overlap
ChIP body of pancreas ENCFF269EDN 337 bp overlap
ChIP body of pancreas ENCFF798MEO 196 bp overlap
ChIP brain microvascular endothelial cell ENCFF526VHE 206 bp overlap
ChIP cardiac muscle cell ENCFF728JSA 251 bp overlap
ChIP chondrocyte ENCFF134ORZ 325 bp overlap
ChIP choroid plexus epithelial cell ENCFF407YNR 206 bp overlap
ChIP endodermal cell ENCFF471YCZ 321 bp overlap
ChIP heart right ventricle ENCFF027ORH 135 bp overlap
ChIP heart right ventricle ENCFF577TID 270 bp overlap
ChIP hiPSC GSE115407.CTCF.hiPSC 234 bp overlap
ChIP neural progenitor cell ENCFF420RBO 122 bp overlap
ChIP osteocyte ENCFF929FPD 279 bp overlap
ChIP parathyroid adenoma ENCFF173NJK 299 bp overlap
ChIP parathyroid adenoma ENCFF173NJK 98 bp overlap
ChIP placenta ENCFF029PHY 275 bp overlap
ChIP progenitor cell of endocrine pancreas ENCFF492KHV 304 bp overlap
ChIP retinal pigment epithelial cell ENCFF810AAG 205 bp overlap
Cebpa 2 datasets
ChIP BLaER1 ENCFF031ISE 264 bp overlap
ChIP BLaER1 ENCFF093OYK 147 bp overlap
ERF::FIGLA 2 datasets
Motif DE_12h DE_12h-ERFFIGLA_MA1934.2 13 bp overlap
Motif ES_0h ES_0h-ERFFIGLA_MA1934.2 13 bp overlap
ESR1 1 dataset
ChIP MCF-7 GSE119057.ESR1.MCF-7 80 bp overlap
ETV2::FIGLA 2 datasets
Motif DE_12h DE_12h-ETV2FIGLA_MA1941.2 13 bp overlap
Motif ES_0h ES_0h-ETV2FIGLA_MA1941.2 13 bp overlap
ETV5::FIGLA 2 datasets
Motif DE_12h DE_12h-ETV5FIGLA_MA1945.2 14 bp overlap
Motif ES_0h ES_0h-ETV5FIGLA_MA1945.2 14 bp overlap
FIGLA 3 datasets
Motif DE_12h DE_12h-FIGLA_MA0820.2 6 bp overlap
Motif DE_12h DE_12h-FIGLA_MA0820.2 6 bp overlap
Motif ES_0h ES_0h-FIGLA_MA0820.2 6 bp overlap
GLIS3 1 dataset
ChIP H9_plus GSE109562.GLIS3.H9_plus 232 bp overlap
IKZF2 2 datasets
Motif DE_12h DE_12h-IKZF2_MA2326.1 6 bp overlap
Motif ES_0h ES_0h-IKZF2_MA2326.1 6 bp overlap
JUND 1 dataset
Motif DE_12h DE_12h-JUND_MA0492.2 11 bp overlap
MAZ 2 datasets
Motif DE_12h DE_12h-MAZ_MA1522.2 8 bp overlap
Motif ES_0h ES_0h-MAZ_MA1522.2 8 bp overlap
PLAG1 2 datasets
Motif DE_12h DE_12h-PLAG1_MA0163.1 14 bp overlap
Motif ES_0h ES_0h-PLAG1_MA0163.1 14 bp overlap
Plagl1 1 dataset
Motif DE_12h DE_12h-Plagl1_MA1615.2 8 bp overlap
Prdm14 2 datasets
Motif DE_12h DE_12h-Prdm14_MA1998.2 8 bp overlap
Motif ES_0h ES_0h-Prdm14_MA1998.2 8 bp overlap
Prdm4 2 datasets
Motif DE_12h DE_12h-Prdm4_MA1647.3 11 bp overlap
Motif ES_0h ES_0h-Prdm4_MA1647.3 11 bp overlap
RAD21 7 datasets
ChIP H1 ENCFF698EWO 200 bp overlap
ChIP H1 ENCFF967OJF 214 bp overlap
ChIP HCT116 ENCFF568PEO 209 bp overlap
ChIP HepG2 ENCFF906QIS 188 bp overlap
ChIP Ishikawa ENCFF570JVV 167 bp overlap
ChIP MCF-7 ENCFF694KOM 240 bp overlap
ChIP MCF-7 ENCFF724VCQ 175 bp overlap
RELA 1 dataset
ChIP SGBS_TNF GSE64233.RELA.SGBS_TNF 200 bp overlap
SNAI1 2 datasets
Motif DE_12h DE_12h-SNAI1_MA1558.2 7 bp overlap
Motif ES_0h ES_0h-SNAI1_MA1558.2 7 bp overlap
SNAI3 2 datasets
Motif DE_12h DE_12h-SNAI3_MA1559.2 9 bp overlap
Motif ES_0h ES_0h-SNAI3_MA1559.2 9 bp overlap
SPIB 2 datasets
Motif DE_12h DE_12h-SPIB_MA0081.3 13 bp overlap
Motif ES_0h ES_0h-SPIB_MA0081.3 13 bp overlap
STAG1 2 datasets
ChIP MCF-7 ERP000209.STAG1.MCF-7 185 bp overlap
ChIP MCF-7_E2 ERP000209.STAG1.MCF-7_E2 111 bp overlap
Spi1 2 datasets
Motif DE_12h DE_12h-Spi1_MA0080.7 13 bp overlap
Motif ES_0h ES_0h-Spi1_MA0080.7 13 bp overlap
TCF12 2 datasets
Motif DE_12h DE_12h-TCF12_MA1648.2 7 bp overlap
Motif ES_0h ES_0h-TCF12_MA1648.2 7 bp overlap
TCF3 2 datasets
Motif DE_12h DE_12h-TCF3_MA0522.4 7 bp overlap
Motif ES_0h ES_0h-TCF3_MA0522.4 7 bp overlap
TCF4 2 datasets
Motif DE_12h DE_12h-TCF4_MA0830.3 8 bp overlap
Motif ES_0h ES_0h-TCF4_MA0830.3 8 bp overlap
TFAP2A 2 datasets
Motif DE_12h DE_12h-TFAP2A_MA0003.5 9 bp overlap
Motif ES_0h ES_0h-TFAP2A_MA0003.5 9 bp overlap
TFAP2B 2 datasets
Motif DE_12h DE_12h-TFAP2B_MA0812.2 9 bp overlap
Motif ES_0h ES_0h-TFAP2B_MA0812.2 9 bp overlap
TFAP2C 2 datasets
Motif DE_12h DE_12h-TFAP2C_MA0814.3 9 bp overlap
Motif ES_0h ES_0h-TFAP2C_MA0814.3 9 bp overlap
TFAP2E 2 datasets
Motif DE_12h DE_12h-TFAP2E_MA1569.2 9 bp overlap
Motif ES_0h ES_0h-TFAP2E_MA1569.2 9 bp overlap
TFAP4::ETV1 2 datasets
Motif DE_12h DE_12h-TFAP4ETV1_MA1966.2 13 bp overlap
Motif ES_0h ES_0h-TFAP4ETV1_MA1966.2 13 bp overlap
ZEB1 3 datasets
Motif DE_12h DE_12h-ZEB1_MA0103.4 6 bp overlap
Motif DE_12h DE_12h-ZEB1_MA0103.4 6 bp overlap
Motif ES_0h ES_0h-ZEB1_MA0103.4 6 bp overlap
ZNF148 2 datasets
Motif DE_12h DE_12h-ZNF148_MA1653.2 10 bp overlap
Motif ES_0h ES_0h-ZNF148_MA1653.2 10 bp overlap
Zfp335 2 datasets
Motif DE_12h DE_12h-Zfp335_MA2002.2 7 bp overlap
Motif ES_0h ES_0h-Zfp335_MA2002.2 7 bp overlap