Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

51 transcription factors

AR 1 dataset

ChIP breast_tumor_Male_26 GSE104399.AR.breast_tumor_Male_26 268 bp overlap

BARX1 2 datasets

Motif DE_36h DE_36h-BARX1_MA0875.2 6 bp overlap

Motif DE_60h DE_60h-BARX1_MA0875.2 6 bp overlap

BSX 2 datasets

Motif DE_36h DE_36h-BSX_MA0876.2 6 bp overlap

Motif DE_60h DE_60h-BSX_MA0876.2 6 bp overlap

CHD7 1 dataset

ChIP hiPSC_derived_lt-NES GSE108506.CHD7.hiPSC_derived_lt-NES 208 bp overlap

DLX1 2 datasets

Motif DE_36h DE_36h-DLX1_MA0879.3 6 bp overlap

Motif DE_60h DE_60h-DLX1_MA0879.3 6 bp overlap

DLX6 2 datasets

Motif DE_36h DE_36h-DLX6_MA0882.2 6 bp overlap

Motif DE_60h DE_60h-DLX6_MA0882.2 6 bp overlap

Dlx2 2 datasets

Motif DE_36h DE_36h-Dlx2_MA0885.3 8 bp overlap

Motif DE_60h DE_60h-Dlx2_MA0885.3 8 bp overlap

Dlx3 2 datasets

Motif DE_36h DE_36h-Dlx3_MA0880.2 6 bp overlap

Motif DE_60h DE_60h-Dlx3_MA0880.2 6 bp overlap

Dlx4 2 datasets

Motif DE_36h DE_36h-Dlx4_MA0881.2 6 bp overlap

Motif DE_60h DE_60h-Dlx4_MA0881.2 6 bp overlap

Dlx5 2 datasets

Motif DE_36h DE_36h-Dlx5_MA1476.3 8 bp overlap

Motif DE_60h DE_60h-Dlx5_MA1476.3 8 bp overlap

EOMES 1 dataset

ChIP hESC GSE26097.EOMES.hESC 320 bp overlap

ESR1 5 datasets

ChIP Ishikawa ENCSR000BKL.ESR1.Ishikawa 111 bp overlap

ChIP MCF-7_estradiol_4h GSE99626.ESR1.MCF-7_estradiol_4h 181 bp overlap

ChIP SUM44PE_ESR1_wildtype GSE100074.ESR1.SUM44PE_ESR1_wildtype 297 bp overlap

ChIP breast_tumor_Male_26 GSE104399.ESR1.breast_tumor_Male_26 343 bp overlap

ChIP primary-endometrium-cancer_E1_DSG GSE114737.ESR1.primary-endometrium-cancer_E1_DSG 264 bp overlap

ESR1_Y537C 1 dataset

ChIP SUM44PE__ESR1_mutant_LTED GSE100074.ESR1_Y537C.SUM44PE__ESR1_mutant_LTED 303 bp overlap

ESRRG 1 dataset

ChIP cardiomyocyte GSE113760.ESRRG.cardiomyocyte 273 bp overlap

EZH2 1 dataset

ChIP A-1847_CARM1-KO GSE95643.EZH2.A-1847_CARM1-KO 297 bp overlap

FOXA1 2 datasets

ChIP T-47D_JC4747 GSE126004.FOXA1.T-47D_JC4747 187 bp overlap

ChIP breast_tumor_Male_14 GSE104399.FOXA1.breast_tumor_Male_14 182 bp overlap

FOXA2 3 datasets

ChIP Caco-2 GSE66218.FOXA2.Caco-2 134 bp overlap

ChIP DE DE-FOXA2-1 517 bp overlap

ChIP DE DE-FOXA2-2 515 bp overlap

GATA4 3 datasets

ChIP DE DE-GATA4-1 473 bp overlap

ChIP DE DE-GATA4-2 510 bp overlap

ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 236 bp overlap

GATA6 9 datasets

ChIP DE DE-GATA6-1 445 bp overlap

ChIP DE DE-GATA6-2 480 bp overlap

ChIP DE_D1 S09-DE-d1-GATA6-exp1 367 bp overlap

ChIP DE_D1 S14-DE-d1-GATA6-exp1 317 bp overlap

ChIP DE_D1 S41-DE-d1-GATA6-exp2 278 bp overlap

ChIP DE_D2 S55-DE-d2-GATA6-exp2 506 bp overlap

ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 340 bp overlap

ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 356 bp overlap

ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 418 bp overlap

GBX2 2 datasets

Motif DE_36h DE_36h-GBX2_MA0890.2 6 bp overlap

Motif DE_60h DE_60h-GBX2_MA0890.2 6 bp overlap

HESX1 2 datasets

Motif DE_36h DE_36h-HESX1_MA0894.2 6 bp overlap

Motif DE_60h DE_60h-HESX1_MA0894.2 6 bp overlap

HOXA7 2 datasets

Motif DE_36h DE_36h-HOXA7_MA1498.3 6 bp overlap

Motif DE_60h DE_60h-HOXA7_MA1498.3 6 bp overlap

Hmx1 1 dataset

Motif DE_36h DE_36h-Hmx1_MA0896.2 9 bp overlap

Hmx2 1 dataset

Motif DE_36h DE_36h-Hmx2_MA0897.2 15 bp overlap

ISL2 1 dataset

Motif DE_36h DE_36h-ISL2_MA0914.2 6 bp overlap

JUN 3 datasets

ChIP DE_D1 S40-DE-d1-JUN-exp2 279 bp overlap

ChIP DE_D2 S02-DE-d2-JUN-exp1 328 bp overlap

ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 221 bp overlap

KDM1A 2 datasets

ChIP pancreatic-progenitor_GT GSE104840.KDM1A.pancreatic-progenitor_GT 107 bp overlap

ChIP pancreatic-progenitor_PP1 GSE104840.KDM1A.pancreatic-progenitor_PP1 177 bp overlap

LBX2 2 datasets

Motif DE_36h DE_36h-LBX2_MA0699.2 6 bp overlap

Motif DE_60h DE_60h-LBX2_MA0699.2 6 bp overlap

LHX2 2 datasets

Motif DE_36h DE_36h-LHX2_MA0700.3 6 bp overlap

Motif DE_60h DE_60h-LHX2_MA0700.3 6 bp overlap

MEIS1 2 datasets

Motif DE_36h DE_36h-MEIS1_MA0498.3 5 bp overlap

Motif DE_60h DE_60h-MEIS1_MA0498.3 5 bp overlap

MGA::EVX1 2 datasets

Motif DE_36h DE_36h-MGAEVX1_MA1960.2 11 bp overlap

Motif DE_60h DE_60h-MGAEVX1_MA1960.2 11 bp overlap

MSX1 2 datasets

Motif DE_36h DE_36h-MSX1_MA0666.3 6 bp overlap

Motif DE_60h DE_60h-MSX1_MA0666.3 6 bp overlap

MSX2 2 datasets

Motif DE_36h DE_36h-MSX2_MA0708.3 6 bp overlap

Motif DE_60h DE_60h-MSX2_MA0708.3 6 bp overlap

MXI1 2 datasets

Motif DE_36h DE_36h-MXI1_MA1108.3 6 bp overlap

Motif DE_60h DE_60h-MXI1_MA1108.3 6 bp overlap

MYC 1 dataset

ChIP CD34 GSE85488.MYC.CD34 113 bp overlap

Msx3 2 datasets

Motif DE_36h DE_36h-Msx3_MA0709.2 6 bp overlap

Motif DE_60h DE_60h-Msx3_MA0709.2 6 bp overlap

NKX2-3 1 dataset

Motif DE_36h DE_36h-NKX2-3_MA0672.2 8 bp overlap

NKX2-8 1 dataset

Motif DE_36h DE_36h-NKX2-8_MA0673.2 8 bp overlap

Nkx3-2 1 dataset

Motif DE_36h DE_36h-Nkx3-2_MA0122.4 10 bp overlap

Nobox 2 datasets

Motif DE_36h DE_36h-Nobox_MA0125.2 6 bp overlap

Motif DE_60h DE_60h-Nobox_MA0125.2 6 bp overlap

PDX1 1 dataset

ChIP hiPSC GSE125768.PDX1.hiPSC 185 bp overlap

PGR 1 dataset

ChIP breast_tumor_Male_26 GSE104399.PGR.breast_tumor_Male_26 314 bp overlap

Pou5f1::Sox2 2 datasets

Motif DE_36h DE_36h-Pou5f1Sox2_MA0142.1 15 bp overlap

Motif DE_60h DE_60h-Pou5f1Sox2_MA0142.1 15 bp overlap

RAX 2 datasets

Motif DE_36h DE_36h-RAX_MA0718.2 6 bp overlap

Motif DE_60h DE_60h-RAX_MA0718.2 6 bp overlap

SMAD2-3 2 datasets

ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 383 bp overlap

ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 326 bp overlap

SMAD2_3 2 datasets

ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 407 bp overlap

ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 449 bp overlap

SMAD4 1 dataset

ChIP endoderm GSE29422.SMAD4.endoderm 149 bp overlap

SOX17 1 dataset

ChIP DE_D2 DED2-SOX17_Batch_II 361 bp overlap

SOX17_M 1 dataset

ChIP DE_D2 DED2-SOX17-M_Batch_II 425 bp overlap

TEAD1 2 datasets

Motif DE_36h DE_36h-TEAD1_MA0090.4 9 bp overlap

Motif DE_60h DE_60h-TEAD1_MA0090.4 9 bp overlap

USF1 2 datasets

Motif DE_36h DE_36h-USF1_MA0093.4 10 bp overlap

Motif DE_60h DE_60h-USF1_MA0093.4 10 bp overlap

Genome Browser