chr3 : 6,515,635 6,516,686
1,051 bp 32 TFs 1 linked gene
This 1.1 kb open chromatin element is linked to ENSG00000189229 and is bound by 32 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
ENSG00000189229 7.9 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr3:6,510,635 – 6,521,686
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
32 transcription factors
Source
Cell type
CTCF 1 dataset
ChIP stomach ENCSR185CCV.CTCF.stomach 226 bp overlap
DPF2 1 dataset
ChIP GM12878 ENCSR509FWH.DPF2.GM12878 329 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 362 bp overlap
ETV6 1 dataset
ChIP GM12878 ENCFF105ZMI 54 bp overlap
EZH2 1 dataset
ChIP A-1847_CARM1-KO GSE95643.EZH2.A-1847_CARM1-KO 640 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 698 bp overlap
ChIP DE DE-FOXA2-2 727 bp overlap
GABPB1 1 dataset
ChIP K562 ENCFF015GDS 469 bp overlap
GATA4 3 datasets
ChIP DE DE-GATA4-1 847 bp overlap
ChIP DE DE-GATA4-2 894 bp overlap
ChIP foregut GSE117136.GATA4.foregut 441 bp overlap
GATA6 9 datasets
ChIP DE DE-GATA6-1 659 bp overlap
ChIP DE DE-GATA6-2 940 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 329 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 586 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 439 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 550 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 591 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 441 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 427 bp overlap
IKZF1 1 dataset
ChIP GM12878 ENCFF753XDO 290 bp overlap
IKZF2 4 datasets
ChIP GM12878 ENCFF238LYK 601 bp overlap
ChIP GM12878 ENCFF918AID 551 bp overlap
ChIP GM12878 ENCSR680UQE.IKZF2.GM12878 370 bp overlap
ChIP GM12878 ENCSR822AHX.IKZF2.GM12878 318 bp overlap
IRF4 1 dataset
ChIP BC-3 GSE132777.IRF4.BC-3 211 bp overlap
JUNB 1 dataset
ChIP GM12878 ENCFF667EJQ 58 bp overlap
MTA2 2 datasets
ChIP GM12878 ENCFF615CWQ 399 bp overlap
ChIP GM12878 ENCSR293QAR.MTA2.GM12878 574 bp overlap
NFIC 1 dataset
ChIP GM12878 ENCFF259FWL 153 bp overlap
NR2F1 2 datasets
ChIP GM12878 ENCFF273VKX 505 bp overlap
ChIP GM12878 ENCSR514VYD.NR2F1.GM12878 272 bp overlap
POLR2A 1 dataset
ChIP K562 ENCFF215CWW 357 bp overlap
RAD51 1 dataset
ChIP GM12878 ENCSR482TWQ.RAD51.GM12878 298 bp overlap
RBM22 1 dataset
ChIP K-562 GSE120104.RBM22.K-562 182 bp overlap
RELB 1 dataset
ChIP GM12878 ENCSR387QUV.RELB.GM12878 312 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 838 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 272 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 615 bp overlap
SPI1 2 datasets
ChIP K-562 ENCSR000BGW.SPI1.K-562 148 bp overlap
ChIP K-562_NABUT GSE74999.SPI1.K-562_NABUT 118 bp overlap
T 1 dataset
ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 479 bp overlap
TBX21 2 datasets
ChIP GM12878 ENCFF951HUW 216 bp overlap
ChIP GM12878 ENCSR739IHN.TBX21.GM12878 344 bp overlap
ZNF19 1 dataset
ChIP HEK293T GSE78099.ZNF19.HEK293T 294 bp overlap