Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

25 transcription factors

BCL6B 2 datasets

Motif DE_24h DE_24h-BCL6B_MA0731.1 17 bp overlap

Motif DE_60h DE_60h-BCL6B_MA0731.1 17 bp overlap

EWSR1-FLI1 1 dataset

Motif DE_60h DE_60h-EWSR1-FLI1_MA0149.1 18 bp overlap

FOXA2 2 datasets

ChIP DE DE-FOXA2-1 418 bp overlap

ChIP DE DE-FOXA2-2 571 bp overlap

GATA2 1 dataset

Motif DE_60h DE_60h-GATA2_MA0036.4 7 bp overlap

GATA4 4 datasets

ChIP DE DE-GATA4-1 698 bp overlap

ChIP DE DE-GATA4-2 744 bp overlap

Motif DE_24h DE_24h-GATA4_MA0482.3 8 bp overlap

Motif DE_60h DE_60h-GATA4_MA0482.3 8 bp overlap

GATA6 8 datasets

ChIP DE DE-GATA6-1 592 bp overlap

ChIP DE DE-GATA6-2 700 bp overlap

ChIP DE_D1 S09-DE-d1-GATA6-exp1 576 bp overlap

ChIP DE_D1 S14-DE-d1-GATA6-exp1 527 bp overlap

ChIP DE_D1 S41-DE-d1-GATA6-exp2 807 bp overlap

ChIP DE_D2 S55-DE-d2-GATA6-exp2 573 bp overlap

ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 305 bp overlap

ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 284 bp overlap

HMGA2 1 dataset

ChIP WTC11 ENCFF535JLP 155 bp overlap

HOXB13 2 datasets

Motif DE_24h DE_24h-HOXB13_MA0901.3 9 bp overlap

Motif DE_60h DE_60h-HOXB13_MA0901.3 9 bp overlap

Hoxa13 2 datasets

Motif DE_24h DE_24h-Hoxa13_MA0650.4 8 bp overlap

Motif DE_60h DE_60h-Hoxa13_MA0650.4 8 bp overlap

JUN 3 datasets

ChIP DE_D1 S08-DE-d1-JUN-exp1 253 bp overlap

ChIP DE_D1 S40-DE-d1-JUN-exp2 569 bp overlap

ChIP DE_D2 S02-DE-d2-JUN-exp1 471 bp overlap

KLF1 2 datasets

Motif DE_24h DE_24h-KLF1_MA0493.3 8 bp overlap

Motif DE_60h DE_60h-KLF1_MA0493.3 8 bp overlap

KLF2 2 datasets

Motif DE_24h DE_24h-KLF2_MA1515.2 8 bp overlap

Motif DE_60h DE_60h-KLF2_MA1515.2 8 bp overlap

KLF4 2 datasets

Motif DE_24h DE_24h-KLF4_MA0039.5 8 bp overlap

Motif DE_60h DE_60h-KLF4_MA0039.5 8 bp overlap

KLF5 2 datasets

Motif DE_24h DE_24h-KLF5_MA0599.1 10 bp overlap

Motif DE_60h DE_60h-KLF5_MA0599.1 10 bp overlap

NANOG 1 dataset

ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 181 bp overlap

Nfat5 2 datasets

Motif DE_24h DE_24h-Nfat5_MA0606.3 8 bp overlap

Motif DE_60h DE_60h-Nfat5_MA0606.3 8 bp overlap

Nfatc2 2 datasets

Motif DE_24h DE_24h-Nfatc2_MA0152.3 8 bp overlap

Motif DE_60h DE_60h-Nfatc2_MA0152.3 8 bp overlap

POU5F1_M 1 dataset

ChIP DE_D1 DED1-OCT4-M_Batch_II 330 bp overlap

PRDM9 1 dataset

Motif DE_60h DE_60h-PRDM9_MA1723.2 20 bp overlap

SMAD2_3 5 datasets

ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 268 bp overlap

ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 357 bp overlap

ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 665 bp overlap

ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 379 bp overlap

ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 267 bp overlap

SMARCC1 1 dataset

ChIP DE_D1 S15-DE-d1-BAF155-exp1 263 bp overlap

SOX17_M 1 dataset

ChIP DE_D2 DED2-SOX17-M_Batch_II 355 bp overlap

TBP 2 datasets

Motif DE_24h DE_24h-TBP_MA0108.3 7 bp overlap

Motif DE_60h DE_60h-TBP_MA0108.3 7 bp overlap

ZKSCAN5 1 dataset

Motif DE_60h DE_60h-ZKSCAN5_MA1652.2 9 bp overlap

ZNF16 1 dataset

Motif DE_60h DE_60h-ZNF16_MA1654.2 21 bp overlap

Gene	Dist. to TSS	Distance	Link type
IDH1	39.0 kb	Distal	Multiome
PIKFYVE	50.1 kb	Distal	Multiome
ENSG00000290929	103.5 kb	Distal	Multiome
PTH2R	143.6 kb	Distal	Multiome
PLEKHM3	190.6 kb	Distal	Multiome

Genome Browser