Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

32 transcription factors

AFF4 1 dataset

ChIP WTC11 ENCFF556XTF 445 bp overlap

Alx4 1 dataset

Motif DE_60h DE_60h-Alx4_MA0853.2 12 bp overlap

BHLHE22 1 dataset

Motif DE_12h DE_12h-BHLHE22_MA1635.2 6 bp overlap

CHD1 1 dataset

ChIP WA01 ENCSR000AQK.CHD1.WA01 210 bp overlap

CUX1 1 dataset

Motif DE_60h DE_60h-CUX1_MA0754.3 9 bp overlap

CUX2 1 dataset

Motif DE_60h DE_60h-CUX2_MA0755.2 9 bp overlap

Cebpa 1 dataset

ChIP BLaER1 ENCFF460KDD 132 bp overlap

EZH2 1 dataset

ChIP neural progenitor cell ENCFF472NFV 92 bp overlap

FOXA2 2 datasets

ChIP DE DE-FOXA2-1 289 bp overlap

ChIP DE DE-FOXA2-2 470 bp overlap

GATA4 3 datasets

ChIP DE DE-GATA4-1 344 bp overlap

ChIP DE DE-GATA4-2 345 bp overlap

ChIP DE DE-GATA4-2 566 bp overlap

GATA6 6 datasets

ChIP DE DE-GATA6-1 401 bp overlap

ChIP DE DE-GATA6-2 485 bp overlap

ChIP DE_D1 S09-DE-d1-GATA6-exp1 536 bp overlap

ChIP DE_D1 S14-DE-d1-GATA6-exp1 623 bp overlap

ChIP DE_D1 S41-DE-d1-GATA6-exp2 596 bp overlap

ChIP DE_D2 S55-DE-d2-GATA6-exp2 360 bp overlap

JUN 2 datasets

ChIP DE_D1 S08-DE-d1-JUN-exp1 280 bp overlap

ChIP DE_D1 S40-DE-d1-JUN-exp2 320 bp overlap

NHLH1 1 dataset

Motif DE_12h DE_12h-NHLH1_MA0048.3 9 bp overlap

NKX2-2 1 dataset

Motif DE_12h DE_12h-NKX2-2_MA1645.2 8 bp overlap

Neurod2 1 dataset

Motif DE_12h DE_12h-Neurod2_MA1993.2 6 bp overlap

ONECUT1 1 dataset

Motif DE_60h DE_60h-ONECUT1_MA0679.3 9 bp overlap

ONECUT2 1 dataset

Motif DE_60h DE_60h-ONECUT2_MA0756.3 8 bp overlap

ONECUT3 1 dataset

Motif DE_60h DE_60h-ONECUT3_MA0757.2 12 bp overlap

Olig2 1 dataset

Motif DE_12h DE_12h-Olig2_MA1997.2 6 bp overlap

PKNOX1 1 dataset

Motif DE_12h DE_12h-PKNOX1_MA0782.3 10 bp overlap

POU5F1 1 dataset

ChIP DE_D1 DED1-OCT4_Batch_II 260 bp overlap

RBPJ 1 dataset

Motif DE_12h DE_12h-RBPJ_MA1116.2 6 bp overlap

SMAD2_3 4 datasets

ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 296 bp overlap

ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 502 bp overlap

ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 252 bp overlap

ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 268 bp overlap

SOX17_M 1 dataset

ChIP DE_D2 DED2-SOX17-M_Batch_II 345 bp overlap

STAT3 1 dataset

Motif DE_12h DE_12h-STAT3_MA0144.3 9 bp overlap

Spz1 1 dataset

Motif DE_12h DE_12h-Spz1_MA0111.1 11 bp overlap

Tcf12 1 dataset

Motif DE_12h DE_12h-Tcf12_MA0521.3 6 bp overlap

Twist2 1 dataset

Motif DE_12h DE_12h-Twist2_MA0633.3 6 bp overlap

ZFP14 1 dataset

Motif DE_12h DE_12h-ZFP14_MA1972.1 15 bp overlap

ZNF257 1 dataset

Motif DE_12h DE_12h-ZNF257_MA1710.2 10 bp overlap

ZNF582 1 dataset

Motif DE_12h DE_12h-ZNF582_MA1983.2 19 bp overlap

Zfp809 1 dataset

Motif DE_12h DE_12h-Zfp809_MA2125.1 9 bp overlap

Genome Browser