chrY : 14,522,417 14,522,710
293 bp 18 TFs 1 linked gene
This 293 bp open chromatin element is linked to NLGN4Y and is bound by 18 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
NLGN4Y at TSS At TSS Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chrY:14,517,417 – 14,527,710
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
18 transcription factors
Source
Cell type
AR 4 datasets
ChIP LNCaP_FOXA1 ERP003503.AR.LNCaP_FOXA1 106 bp overlap
ChIP LNCaP_r1881 GSE94682.AR.LNCaP_r1881 114 bp overlap
ChIP VCaP_DHAT_2H GSE28950.AR.VCaP_DHAT_2H 133 bp overlap
ChIP VCaP_R1881_30M GSE84432.AR.VCaP_R1881_30M 73 bp overlap
ARID2 1 dataset
ChIP NGP_ARID1A-mut2 GSE134626.ARID2.NGP_ARID1A-mut2 247 bp overlap
ASH2L 1 dataset
ChIP WA01 ENCSR850KIP.ASH2L.WA01 293 bp overlap
JUN 2 datasets
ChIP ESC S24-ESC-d0-JUN-exp1 258 bp overlap
ChIP HUES-8 GSE109524.JUN.HUES-8 206 bp overlap
MYCN 1 dataset
ChIP LA-N-5 GSE138295.MYCN.LA-N-5 151 bp overlap
NANOG 1 dataset
ChIP HUES-8 GSE109524.NANOG.HUES-8 197 bp overlap
PCGF1 1 dataset
ChIP WA01 GSE104690.PCGF1.WA01 169 bp overlap
POLR2A 1 dataset
ChIP GM12891 ENCFF012SUT 293 bp overlap
RAD21 1 dataset
ChIP neural ENCSR198ZYJ.RAD21.neural 154 bp overlap
SAP30 1 dataset
ChIP WA01 ENCSR000ATR.SAP30.WA01 147 bp overlap
SIN3A 1 dataset
ChIP WA01 ENCSR000EBO.SIN3A.WA01 154 bp overlap
SMC3 1 dataset
ChIP neural ENCSR404BPV.SMC3.neural 228 bp overlap
TAF1 2 datasets
ChIP WA01 ENCSR000BHO.TAF1.WA01 293 bp overlap
ChIP neural ENCSR000BTX.TAF1.neural 131 bp overlap
TAF2 1 dataset
ChIP hESC GSE17917.TAF2.hESC 62 bp overlap
TBP 6 datasets
ChIP H1 ENCFF859IIO 259 bp overlap
ChIP WA01 ENCSR000ECB.TBP.WA01 263 bp overlap
ChIP hESC GSE122298.TBP.hESC 293 bp overlap
ChIP hESC_10h GSE122298.TBP.hESC_10h 293 bp overlap
ChIP hESC_2h GSE122298.TBP.hESC_2h 293 bp overlap
ChIP hESC_8h GSE122298.TBP.hESC_8h 288 bp overlap
YY1 1 dataset
ChIP WA01 ENCSR000BKD.YY1.WA01 103 bp overlap