chr19 : 8,452,486 8,452,785
299 bp 34 TFs 2 linked genes
This 299 bp open chromatin element is linked to ENSG00000279827 and HNRNPM and is bound by 34 transcription factors.
Linked Genes
2 genes
Gene Expression Dist. to TSS Distance Link type
ENSG00000279827 6.9 kb Proximal Proximity
HNRNPM 7.6 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr19:8,447,486 – 8,457,785
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
34 transcription factors
Source
Cell type
ARID1A 2 datasets
ChIP RMG-I GSE104545.ARID1A.RMG-I 284 bp overlap
ChIP endometrial-epithelial-cells GSE106660.ARID1A.endometrial-epithelial-cells 70 bp overlap
ARID5B 1 dataset
ChIP HepG2 ENCFF964FWK 85 bp overlap
CTCF 1 dataset
ChIP MDA-MB-435_Asynchronous GSE102019.CTCF.MDA-MB-435_Asynchronous 120 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF335XTP 299 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 240 bp overlap
ESR1 1 dataset
ChIP breast_mrnahist ERP002305.ESR1.breast_mrnahist 139 bp overlap
FOS 2 datasets
ChIP CFPAC-1 GSE119930.FOS.CFPAC-1 233 bp overlap
ChIP HCT-116_A7A GSE152144.FOS.HCT-116_A7A 235 bp overlap
FOXA1 1 dataset
ChIP breast-cancer_Veh-2856 GSE128018.FOXA1.breast-cancer_Veh-2856 198 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 299 bp overlap
ChIP DE DE-FOXA2-2 299 bp overlap
GATA3 1 dataset
ChIP breast_tumor_Male_21 GSE104399.GATA3.breast_tumor_Male_21 265 bp overlap
GATA4 2 datasets
ChIP DE DE-GATA4-1 299 bp overlap
ChIP DE DE-GATA4-2 299 bp overlap
GATA6 8 datasets
ChIP DE DE-GATA6-1 299 bp overlap
ChIP DE DE-GATA6-2 299 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 299 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 299 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 299 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 299 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 299 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 299 bp overlap
HNF4A 2 datasets
ChIP liver ENCFF354NRH 51 bp overlap
ChIP liver ENCFF449HPV 79 bp overlap
JUN 4 datasets
ChIP DE_D1 S08-DE-d1-JUN-exp1 284 bp overlap
ChIP DE_D1 S40-DE-d1-JUN-exp2 255 bp overlap
ChIP DE_D2 S02-DE-d2-JUN-exp1 275 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 284 bp overlap
JUNB 1 dataset
ChIP CFPAC-1 GSE119930.JUNB.CFPAC-1 114 bp overlap
MYBL2 2 datasets
ChIP A-673 GSE119971.MYBL2.A-673 67 bp overlap
ChIP A-673 GSE119971.MYBL2.A-673 113 bp overlap
NCAPH2 1 dataset
ChIP IMR-90_FLAG_OIS GSE118494.NCAPH2.IMR-90_FLAG_OIS 237 bp overlap
NCOR1 1 dataset
ChIP LS180_125 GSE39277.NCOR1.LS180_125 61 bp overlap
POU5F1 1 dataset
ChIP DE_D1 DED1-OCT4_Batch_II 258 bp overlap
RBFOX2 4 datasets
ChIP HepG2 ENCFF554DMZ 299 bp overlap
ChIP K-562 ENCSR822LBD.RBFOX2.K-562 79 bp overlap
ChIP K-562 GSE120104.RBFOX2.K-562 105 bp overlap
ChIP K562 ENCFF196WTG 299 bp overlap
RUNX2 1 dataset
ChIP LNCaP-C4-2B GSE33889.RUNX2.LNCaP-C4-2B 299 bp overlap
RXRA 1 dataset
ChIP liver ENCFF077DAP 124 bp overlap
SCRT1 1 dataset
ChIP HEK293 ENCSR605MGM.SCRT1.HEK293 299 bp overlap
SMAD2 2 datasets
ChIP endoderm GSE29422.SMAD2.endoderm 299 bp overlap
ChIP hESC_YAP-_activinA_15h GSE99202.SMAD2.hESC_YAP-_activinA_15h 249 bp overlap
SMAD2_3 5 datasets
ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 299 bp overlap
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 299 bp overlap
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 299 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 299 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 299 bp overlap
SMAD3 1 dataset
ChIP endoderm GSE29422.SMAD3.endoderm 295 bp overlap
SMAD4 1 dataset
ChIP endoderm GSE29422.SMAD4.endoderm 299 bp overlap
SMARCB1 1 dataset
ChIP proliferating-human-fibroblast GSE131711.SMARCB1.proliferating-human-fibroblast 82 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 274 bp overlap
SPI1 1 dataset
ChIP K-562 ENCSR000BGW.SPI1.K-562 157 bp overlap
SUPT5H 1 dataset
ChIP HCT-116_pThr806 GSE138548.SUPT5H.HCT-116_pThr806 179 bp overlap
ZNF316 1 dataset
ChIP K562 ENCFF838QCD 182 bp overlap
ZNF770 1 dataset
ChIP HepG2 ENCFF233UVH 153 bp overlap