chr16 : 49,853,284 49,853,558
274 bp 19 TFs 2 linked genes
This 274 bp open chromatin element is linked to ZNF423 and ENSG00000275155 and is bound by 19 transcription factors.
Linked Genes
2 genes
Gene Expression Dist. to TSS Distance Link type
ZNF423 2.6 kb Proximal Proximity
ENSG00000275155 5.7 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr16:49,848,284 – 49,858,558
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
19 transcription factors
Source
Cell type
AR 1 dataset
ChIP LNCaP_R1881 GSE69043.AR.LNCaP_R1881 152 bp overlap
BCL6 1 dataset
ChIP CD4 GSE59933.BCL6.CD4 57 bp overlap
BRD4 1 dataset
ChIP SK-N-BE2-C_Naive-veh GSE107706.BRD4.SK-N-BE2-C_Naive-veh 163 bp overlap
CBX2 1 dataset
ChIP K-562 ENCSR000ATU.CBX2.K-562 105 bp overlap
CTCF 1 dataset
ChIP gastroesophageal-sphincter ENCSR186NVR.CTCF.gastroesophageal-sphincter 83 bp overlap
EZH2 9 datasets
ChIP DU145_SH4 GSE135623.EZH2.DU145_SH4 171 bp overlap
ChIP GM23248 ENCSR131FFJ.EZH2.GM23248 51 bp overlap
ChIP HCT-116 ENCSR046HGP.EZH2.HCT-116 120 bp overlap
ChIP Hep-3B2-1-7 GSE128137.EZH2.Hep-3B2-1-7 274 bp overlap
ChIP Hep-G2 ENCSR000ARI.EZH2.Hep-G2 155 bp overlap
ChIP LNCaP GSE39459.EZH2.LNCaP 97 bp overlap
ChIP LNCaP-abl GSE39459.EZH2.LNCaP-abl 99 bp overlap
ChIP THP-1 GSE135024.EZH2.THP-1 96 bp overlap
ChIP endothelial cell of umbilical vein ENCFF539AKL 274 bp overlap
FOXA2 3 datasets
ChIP Caco-2 GSE66218.FOXA2.Caco-2 139 bp overlap
ChIP DE DE-FOXA2-1 247 bp overlap
ChIP DE DE-FOXA2-2 232 bp overlap
GATA2 3 datasets
ChIP LNCaP GSE38391.GATA2.LNCaP 204 bp overlap
ChIP LNCaP GSE52725.GATA2.LNCaP 204 bp overlap
ChIP LNCaP_CSFCS GSE69043.GATA2.LNCaP_CSFCS 137 bp overlap
GATA4 5 datasets
ChIP DE DE-GATA4-1 274 bp overlap
ChIP DE DE-GATA4-2 274 bp overlap
ChIP foregut GSE117136.GATA4.foregut 274 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 274 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 262 bp overlap
GATA6 13 datasets
ChIP AGS GSE51705.GATA6.AGS 219 bp overlap
ChIP Caco-2_PROLIF GSE23436.GATA6.Caco-2_PROLIF 136 bp overlap
ChIP DE DE-GATA6-1 274 bp overlap
ChIP DE DE-GATA6-2 274 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 274 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 274 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 274 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 274 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 274 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 274 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 274 bp overlap
ChIP foregut GSE117136.GATA6.foregut 274 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA6.pancreatic-progenitor 274 bp overlap
KLF1 1 dataset
ChIP HEK293 ENCSR859BMR.KLF1.HEK293 186 bp overlap
KLF5 1 dataset
ChIP ESO-26 GSE132680.KLF5.ESO-26 57 bp overlap
KLF9 1 dataset
ChIP HEK293 ENCFF588INF 268 bp overlap
MEIS2 2 datasets
ChIP K-562 ENCSR851BNE.MEIS2.K-562 260 bp overlap
ChIP K562 ENCFF320GSD 272 bp overlap
PBX2 1 dataset
ChIP K-562 ENCSR263DFP.PBX2.K-562 195 bp overlap
REST 4 datasets
ChIP HEK293 ENCFF073DOT 174 bp overlap
ChIP HEK293 ENCSR896UBV.REST.HEK293 87 bp overlap
ChIP colorectal-cancer_shCDH1 GSE112555.REST.colorectal-cancer_shCDH1 129 bp overlap
ChIP colorectal-cancer_shCTRL_dissociated GSE112555.REST.colorectal-cancer_shCTRL_dissociated 86 bp overlap
SMAD2-3 3 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 264 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 274 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 274 bp overlap
SMAD2_3 3 datasets
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 274 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 214 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 217 bp overlap
SS18 1 dataset
ChIP Aska-SS_BAF47KO1 GSE108025.SS18.Aska-SS_BAF47KO1 132 bp overlap