chr16 : 4,248,382 4,248,656
274 bp 27 TFs 1 linked gene
This 274 bp open chromatin element is linked to LINC01569 and is bound by 27 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
LINC01569 5.1 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr16:4,243,382 – 4,253,656
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
27 transcription factors
Source
Cell type
ASCL1 4 datasets
ChIP NCI-H128 GSE69394.ASCL1.NCI-H128 170 bp overlap
ChIP NCI-H2107 GSE69394.ASCL1.NCI-H2107 175 bp overlap
ChIP NCI-H889 GSE69394.ASCL1.NCI-H889 177 bp overlap
ChIP SCLC_ASCLP GSE61197.ASCL1.SCLC_ASCLP 205 bp overlap
ASXL3 2 datasets
ChIP NCI-H1963_Ab1 GSE145028.ASXL3.NCI-H1963_Ab1 274 bp overlap
ChIP NCI-H1963_Ab2 GSE145028.ASXL3.NCI-H1963_Ab2 241 bp overlap
BAP1 2 datasets
ChIP NCI-H1963_shASXL3 GSE145028.BAP1.NCI-H1963_shASXL3 274 bp overlap
ChIP NCI-H1963_shNONT GSE145028.BAP1.NCI-H1963_shNONT 274 bp overlap
BRD4 4 datasets
ChIP NCI-H1963 GSE145028.BRD4.NCI-H1963 274 bp overlap
ChIP NCI-H1963_dBET6 GSE145028.BRD4.NCI-H1963_dBET6 274 bp overlap
ChIP NCI-H1963_shASXL3 GSE145028.BRD4.NCI-H1963_shASXL3 201 bp overlap
ChIP NCI-H1963_shNONT GSE145028.BRD4.NCI-H1963_shNONT 274 bp overlap
CEBPB 1 dataset
ChIP MV4-11 GSE88746.CEBPB.MV4-11 197 bp overlap
DDX5 1 dataset
ChIP NTERA2 GSE58641.DDX5.NTERA2 64 bp overlap
EBF1 1 dataset
ChIP MUTUL GSE75503.EBF1.MUTUL 208 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 274 bp overlap
ChIP DE DE-FOXA2-2 274 bp overlap
FOXP1 1 dataset
ChIP SU-DHL-6 ERP010999.FOXP1.SU-DHL-6 272 bp overlap
GATA4 2 datasets
ChIP DE DE-GATA4-1 274 bp overlap
ChIP DE DE-GATA4-2 274 bp overlap
GATA6 5 datasets
ChIP DE DE-GATA6-1 274 bp overlap
ChIP DE DE-GATA6-2 274 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 274 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 274 bp overlap
ChIP foregut GSE117136.GATA6.foregut 231 bp overlap
KDM1A 1 dataset
ChIP NCI-H526_DMSO GSE66297.KDM1A.NCI-H526_DMSO 193 bp overlap
MED1 1 dataset
ChIP G296S_4 GSE85628.MED1.G296S_4 212 bp overlap
MEF2B 1 dataset
ChIP DLBCL GSE110682.MEF2B.DLBCL 274 bp overlap
MYB 1 dataset
ChIP THP-1 GSE90769.MYB.THP-1 100 bp overlap
MYC 1 dataset
ChIP NCI-H2171 GSE41105.MYC.NCI-H2171 189 bp overlap
SMAD2 1 dataset
ChIP endoderm GSE29422.SMAD2.endoderm 209 bp overlap
SMAD2-3 3 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 274 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 274 bp overlap
ChIP HUVEC-C_TGFB1 GSE134556.SMAD2-3.HUVEC-C_TGFB1 216 bp overlap
SMAD2_3 2 datasets
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 274 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 274 bp overlap
SMAD3 1 dataset
ChIP endoderm GSE29422.SMAD3.endoderm 196 bp overlap
SMAD4 1 dataset
ChIP endoderm GSE29422.SMAD4.endoderm 239 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 274 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 274 bp overlap
STAG2 1 dataset
ChIP OCI-AML-3 GSE111537.STAG2.OCI-AML-3 181 bp overlap
TAL1 1 dataset
ChIP PRIMA5 GSE33850.TAL1.PRIMA5 196 bp overlap
TBX5 4 datasets
ChIP G296S_4 GSE85628.TBX5.G296S_4 231 bp overlap
ChIP cardiomyocyte GSE85628.TBX5.cardiomyocyte 274 bp overlap
ChIP cardiomyocyte_1 GSE85628.TBX5.cardiomyocyte_1 274 bp overlap
ChIP cardiomyocyte_7 GSE85628.TBX5.cardiomyocyte_7 158 bp overlap
TRIM24 1 dataset
ChIP MOLM-13_IACS-9571 GSE100571.TRIM24.MOLM-13_IACS-9571 97 bp overlap