chr1 : 236,685,236 236,685,470
234 bp 25 TFs 1 linked gene
This 234 bp open chromatin element is linked to ACTN2 and is bound by 25 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
ACTN2 1.0 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr1:236,680,236 – 236,690,470
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
25 transcription factors
Source
Cell type
ASCL1 1 dataset
ChIP NCI-H889 GSE69394.ASCL1.NCI-H889 118 bp overlap
CDK9 1 dataset
ChIP MM1-S_JQ1_500NM GSE42355.CDK9.MM1-S_JQ1_500NM 89 bp overlap
CEBPA 1 dataset
ChIP T-47D_progesterone GSE132649.CEBPA.T-47D_progesterone 65 bp overlap
CTCF 1 dataset
ChIP keratinocyte ENCSR000ALJ.CTCF.keratinocyte 96 bp overlap
E2F6 1 dataset
ChIP K-562 ENCSR000BLI.E2F6.K-562 92 bp overlap
EZH2 3 datasets
ChIP GM23338 ENCSR045YHA.EZH2.GM23338 234 bp overlap
ChIP LNCaP-abl GSE39459.EZH2.LNCaP-abl 191 bp overlap
ChIP SF8628 GSE94834.EZH2.SF8628 68 bp overlap
GATA3 1 dataset
ChIP BE2C GSE65664.GATA3.BE2C 156 bp overlap
HAND2 2 datasets
ChIP CLB-Ga GSE90683.HAND2.CLB-Ga 229 bp overlap
ChIP SK-N-BE2-C GSE94822.HAND2.SK-N-BE2-C 179 bp overlap
ISL1 1 dataset
ChIP SK-N-BE2-C GSE94822.ISL1.SK-N-BE2-C 131 bp overlap
MAX 1 dataset
ChIP Ishikawa ENCSR000BTY.MAX.Ishikawa 144 bp overlap
MYC 1 dataset
ChIP NB69 GSE138295.MYC.NB69 230 bp overlap
MYCN 3 datasets
ChIP COG-N-415 GSE138295.MYCN.COG-N-415 234 bp overlap
ChIP LA-N-5 GSE138295.MYCN.LA-N-5 203 bp overlap
ChIP NB-1643 GSE138295.MYCN.NB-1643 172 bp overlap
MYOD1 1 dataset
ChIP RH30_DMSO GSE85169.MYOD1.RH30_DMSO 189 bp overlap
NFIC 1 dataset
ChIP Ishikawa ENCSR000BUT.NFIC.Ishikawa 162 bp overlap
PITX3 1 dataset
ChIP SH-SY5Y GSE93275.PITX3.SH-SY5Y 217 bp overlap
RCOR1 1 dataset
ChIP SK-N-SH ENCFF518EXB 133 bp overlap
RNF2 1 dataset
ChIP SYO-1_shCt GSE139053.RNF2.SYO-1_shCt 127 bp overlap
SETDB1 2 datasets
ChIP HEK293 ENCSR348AGV.SETDB1.HEK293 234 bp overlap
ChIP U2OS ENCSR000EYD.SETDB1.U2OS 234 bp overlap
SMARCA4 2 datasets
ChIP HS-SY-2_HA-tagged GSE108926.SMARCA4.HS-SY-2_HA-tagged 234 bp overlap
ChIP K-562 ENCSR587OQL.SMARCA4.K-562 158 bp overlap
SUZ12 1 dataset
ChIP Aska-SS GSE108025.SUZ12.Aska-SS 228 bp overlap
TEAD4 2 datasets
ChIP BE2C GSE84389.TEAD4.BE2C 168 bp overlap
ChIP SK-N-BE2 GSE84389.TEAD4.SK-N-BE2 168 bp overlap
TFAP2B 1 dataset
ChIP SK-N-SH ENCFF869XXQ 234 bp overlap
TRIM28 1 dataset
ChIP hESC GSE115387.TRIM28.hESC 234 bp overlap
ZNF750 1 dataset
ChIP keratinocyte_diff GSE57702.ZNF750.keratinocyte_diff 234 bp overlap