Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

27 transcription factors

ARID1A 1 dataset

ChIP HAP1 GSE108387.ARID1A.HAP1 219 bp overlap

BRD4 1 dataset

ChIP MV4-11_SGC GSE71776.BRD4.MV4-11_SGC 247 bp overlap

CTCF 3 datasets

ChIP D721Med ENCFF513FYD 211 bp overlap

ChIP HAP1_clone21_CTCF-CRISPR GSE152721.CTCF.HAP1_clone21_CTCF-CRISPR 225 bp overlap

ChIP HAP1_clone21_TSS-CRISPR GSE152721.CTCF.HAP1_clone21_TSS-CRISPR 167 bp overlap

Cebpa 1 dataset

ChIP BLaER1 ENCFF093OYK 227 bp overlap

EOMES 1 dataset

ChIP hESC GSE26097.EOMES.hESC 326 bp overlap

EZH2 1 dataset

ChIP neural progenitor cell ENCFF018MKA 677 bp overlap

EZH2_phosphoT487 1 dataset

ChIP neural_progenitor ENCSR656MXA.EZH2_phosphoT487.neural_progenitor 323 bp overlap

FLI1 1 dataset

ChIP A-673_1_KRAB_GFP GSE106914.FLI1.A-673_1_KRAB_GFP 248 bp overlap

FOXA2 2 datasets

ChIP DE DE-FOXA2-1 686 bp overlap

ChIP DE DE-FOXA2-2 670 bp overlap

GATA4 3 datasets

ChIP DE DE-GATA4-1 757 bp overlap

ChIP DE DE-GATA4-2 823 bp overlap

ChIP foregut GSE117136.GATA4.foregut 384 bp overlap

GATA6 10 datasets

ChIP DE DE-GATA6-1 777 bp overlap

ChIP DE DE-GATA6-2 882 bp overlap

ChIP DE_D1 S09-DE-d1-GATA6-exp1 409 bp overlap

ChIP DE_D1 S14-DE-d1-GATA6-exp1 423 bp overlap

ChIP DE_D1 S41-DE-d1-GATA6-exp2 429 bp overlap

ChIP DE_D2 S55-DE-d2-GATA6-exp2 658 bp overlap

ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 752 bp overlap

ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 369 bp overlap

ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 468 bp overlap

ChIP foregut GSE117136.GATA6.foregut 309 bp overlap

JUN 1 dataset

ChIP DE_D2 S02-DE-d2-JUN-exp1 282 bp overlap

LYL1 1 dataset

ChIP THP-1 GSE63484.LYL1.THP-1 189 bp overlap

NCAPH2 1 dataset

ChIP IMR-90_FLAG_OIS GSE118494.NCAPH2.IMR-90_FLAG_OIS 172 bp overlap

NEUROD1 5 datasets

ChIP D283-Med GSE92582.NEUROD1.D283-Med 449 bp overlap

ChIP D283-Med_shNEUROD1-1579 GSE92582.NEUROD1.D283-Med_shNEUROD1-1579 314 bp overlap

ChIP D341-Med_shGFP GSE92582.NEUROD1.D341-Med_shGFP 403 bp overlap

ChIP D341-Med_shNEUROD1-1154 GSE92582.NEUROD1.D341-Med_shNEUROD1-1154 158 bp overlap

ChIP D341-Med_shNEUROD1-1579 GSE92582.NEUROD1.D341-Med_shNEUROD1-1579 215 bp overlap

OTX2 1 dataset

ChIP retina_Hu7 GSE137311.OTX2.retina_Hu7 208 bp overlap

PSIP1 1 dataset

ChIP T-REx-293 GSE117155.PSIP1.T-REx-293 242 bp overlap

RAD21 3 datasets

ChIP HAP1 GSE152721.RAD21.HAP1 289 bp overlap

ChIP HAP1_clone25 GSE152721.RAD21.HAP1_clone25 209 bp overlap

ChIP THP-1_Pam3csk-180m-Flavo-060m GSE103477.RAD21.THP-1_Pam3csk-180m-Flavo-060m 193 bp overlap

SMAD2 1 dataset

ChIP endoderm GSE29422.SMAD2.endoderm 183 bp overlap

SMAD2-3 2 datasets

ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 664 bp overlap

ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 370 bp overlap

SMAD2_3 3 datasets

ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 263 bp overlap

ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 461 bp overlap

ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 491 bp overlap

SMAD3 1 dataset

ChIP endoderm GSE29422.SMAD3.endoderm 156 bp overlap

SMARCA4 1 dataset

ChIP HS-SY-2_HA-tagged GSE108926.SMARCA4.HS-SY-2_HA-tagged 366 bp overlap

SOX17 1 dataset

ChIP DE_D2 DED2-SOX17_Batch_II 272 bp overlap

SOX17_M 1 dataset

ChIP DE_D2 DED2-SOX17-M_Batch_II 457 bp overlap

SPI1 2 datasets

ChIP BDMC_donorG GSE128834.SPI1.BDMC_donorG 104 bp overlap

ChIP BDMC_donorH GSE128834.SPI1.BDMC_donorH 164 bp overlap

T 1 dataset

ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 229 bp overlap

Genome Browser