chr13 : 90,290,248 90,290,990
742 bp 30 TFs 0 linked genes
This 742 bp open chromatin element has no linked target genes and is bound by 30 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr13:90,285,248 – 90,295,990
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
30 transcription factors
Source
Cell type
AR 1 dataset
ChIP LNCaP_ETOH GSE69043.AR.LNCaP_ETOH 164 bp overlap
BRD4 1 dataset
ChIP K-562_dilution-6-100 GSE140325.BRD4.K-562_dilution-6-100 80 bp overlap
DUX4 1 dataset
ChIP WA01 GSE94322.DUX4.WA01 327 bp overlap
EOMES 3 datasets
Motif DE_48h DE_48h-EOMES_MA0800.2 9 bp overlap
ChIP hESC GSE26097.EOMES.hESC 235 bp overlap
ChIP hESC GSE26097.EOMES.hESC 146 bp overlap
EZH2 1 dataset
ChIP Karpas-422_CPI360-D4 GSE134136.EZH2.Karpas-422_CPI360-D4 257 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 721 bp overlap
ChIP DE DE-FOXA2-2 742 bp overlap
GATA1 4 datasets
ChIP K-562 GSE107726.GATA1.K-562 194 bp overlap
ChIP K-562_dCas9-LSD1 GSE132212.GATA1.K-562_dCas9-LSD1 191 bp overlap
ChIP K-562_enCRISPRi-LK GSE132212.GATA1.K-562_enCRISPRi-LK 190 bp overlap
ChIP erythroid-progenitor_EPrec GSE124163.GATA1.erythroid-progenitor_EPrec 155 bp overlap
GATA2 1 dataset
ChIP TF1 GSE73207.GATA2.TF1 285 bp overlap
GATA3 4 datasets
ChIP A1A3_Brg1KD_Dex GSE112491.GATA3.A1A3_Brg1KD_Dex 198 bp overlap
ChIP A1A3_Brg1KD_EtOH GSE112491.GATA3.A1A3_Brg1KD_EtOH 245 bp overlap
ChIP A1A3_Dex GSE112491.GATA3.A1A3_Dex 196 bp overlap
ChIP T47D-A1-2_Dex GSE112491.GATA3.T47D-A1-2_Dex 103 bp overlap
GATA4 3 datasets
ChIP DE DE-GATA4-1 324 bp overlap
ChIP DE DE-GATA4-1 365 bp overlap
ChIP DE DE-GATA4-2 742 bp overlap
GATA6 8 datasets
ChIP DE DE-GATA6-1 734 bp overlap
ChIP DE DE-GATA6-2 742 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 318 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 742 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 280 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 742 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 742 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 349 bp overlap
KDM3A 1 dataset
ChIP 22Rv1_pLKO GSE109748.KDM3A.22Rv1_pLKO 126 bp overlap
NFKB2 1 dataset
Motif DE_48h DE_48h-NFKB2_MA0778.2 11 bp overlap
PAX3 1 dataset
Motif DE_48h DE_48h-PAX3_MA1546.2 14 bp overlap
POU5F1 1 dataset
ChIP BJ_INDUCED GSE36570.POU5F1.BJ_INDUCED 150 bp overlap
PRDM1 1 dataset
Motif DE_48h DE_48h-PRDM1_MA0508.4 7 bp overlap
PRDM9 1 dataset
Motif DE_48h DE_48h-PRDM9_MA1723.2 20 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 318 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 212 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 742 bp overlap
STAT5A 1 dataset
ChIP K562 ENCFF226BTJ 341 bp overlap
SUZ12 1 dataset
ChIP Karpas-422_CPI360-D4 GSE134136.SUZ12.Karpas-422_CPI360-D4 276 bp overlap
TBR1 1 dataset
Motif DE_48h DE_48h-TBR1_MA0802.2 9 bp overlap
TBX20 1 dataset
Motif DE_48h DE_48h-TBX20_MA0689.1 11 bp overlap
TBX3 1 dataset
Motif DE_48h DE_48h-TBX3_MA1566.3 9 bp overlap
Tbx6 1 dataset
Motif DE_48h DE_48h-Tbx6_MA1567.3 9 bp overlap
ZNF184 1 dataset
Motif DE_48h DE_48h-ZNF184_MA2120.1 13 bp overlap
ZNF75A 1 dataset
Motif DE_48h DE_48h-ZNF75A_MA2097.1 12 bp overlap