chr13 : 63,901,728 – 63,901,902
174 bp 18 TFs 0 linked genes
This 174 bp open chromatin element has no linked target genes and is bound by 18 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr13:63,896,728 – 63,906,902
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
18 transcription factors
Source
Cell type
AR 1 dataset
ChIP LNCaP_M253K_shFOXA1_Ethanol GSE128883.AR.LNCaP_M253K_shFOXA1_Ethanol 139 bp overlap
BRCA1 1 dataset
ChIP K-562 ENCSR223MLH.BRCA1.K-562 149 bp overlap
CTCF 112 datasets
ChIP 81-3 ERP002246.CTCF.81-3 106 bp overlap
ChIP A-549 ENCSR000AUF.CTCF.A-549 174 bp overlap
ChIP A-549 ENCSR000DNA.CTCF.A-549 159 bp overlap
ChIP A-549 ENCSR000DPF.CTCF.A-549 139 bp overlap
ChIP A-673 ENCSR611JJS.CTCF.A-673 174 bp overlap
ChIP A549 ENCFF182TCQ 174 bp overlap
ChIP A673 ENCFF123WOM 174 bp overlap
ChIP BE2C ENCFF757SRF 174 bp overlap
ChIP BE2C ENCSR000DQD.CTCF.BE2C 174 bp overlap
ChIP Caco-2 ENCFF934QYS 174 bp overlap
ChIP D54 ENCSR000DKN.CTCF.D54 156 bp overlap
ChIP D721Med ENCFF513FYD 172 bp overlap
ChIP GM04604 GSE148179.CTCF.GM04604 174 bp overlap
ChIP GM23338 ENCFF772DML 129 bp overlap
ChIP GP5D GSE51234.CTCF.GP5D 163 bp overlap
ChIP H1 ENCFF230QSV 151 bp overlap
ChIP H1 ENCFF414GZI 174 bp overlap
ChIP H1 ENCFF764RHO 174 bp overlap
ChIP H9 ENCFF152GTF 174 bp overlap
ChIP HAP1_2kb GSE152721.CTCF.HAP1_2kb 174 bp overlap
ChIP HAP1_clone21 GSE152721.CTCF.HAP1_clone21 174 bp overlap
ChIP HAP1_clone21_CTCF-CRISPR GSE152721.CTCF.HAP1_clone21_CTCF-CRISPR 174 bp overlap
ChIP HAP1_clone21_CTCF-TSS-CRISPR_1 GSE152721.CTCF.HAP1_clone21_CTCF-TSS-CRISPR_1 174 bp overlap
ChIP HAP1_clone21_CTCF-TSS-CRISPR_2 GSE152721.CTCF.HAP1_clone21_CTCF-TSS-CRISPR_2 174 bp overlap
ChIP HAP1_clone21_TSS-CRISPR GSE152721.CTCF.HAP1_clone21_TSS-CRISPR 174 bp overlap
ChIP HCT-116 ENCSR240PRQ.CTCF.HCT-116 174 bp overlap
ChIP HCT-116 GSE131606.CTCF.HCT-116 174 bp overlap
ChIP HEC-1-B_WT GSE140868.CTCF.HEC-1-B_WT 126 bp overlap
ChIP HeLa GSE126990.CTCF.HeLa 174 bp overlap
ChIP HeLa-Kyoto GSE138405.CTCF.HeLa-Kyoto 174 bp overlap
ChIP HeLa-Kyoto_WAPL_PDS-depleted GSE102884.CTCF.HeLa-Kyoto_WAPL_PDS-depleted 174 bp overlap
ChIP HeLa-S3 ENCFF565UFR 161 bp overlap
ChIP HeLa-S3 ENCSR000DLO.CTCF.HeLa-S3 147 bp overlap
ChIP HeLa-S3 ENCSR000DUB.CTCF.HeLa-S3 123 bp overlap
ChIP HeLa-S3_unsynchro GSE108173.CTCF.HeLa-S3_unsynchro 174 bp overlap
ChIP HeLa_dC9Sun-D3AMut_MIR152 GSE107607.CTCF.HeLa_dC9Sun-D3AMut_MIR152 160 bp overlap
ChIP HeLa_dC9Sun-D3A_CDCC85C GSE107607.CTCF.HeLa_dC9Sun-D3A_CDCC85C 174 bp overlap
ChIP HeLa_dC9Sun-D3A_MIR152 GSE107607.CTCF.HeLa_dC9Sun-D3A_MIR152 129 bp overlap
ChIP HeLa_dC9Sun-D3A_SHB GSE107607.CTCF.HeLa_dC9Sun-D3A_SHB 146 bp overlap
ChIP Hep-G2 ENCSR000AMA.CTCF.Hep-G2 174 bp overlap
ChIP Hep-G2 ERP000209.CTCF.Hep-G2 174 bp overlap
ChIP Hep-G2 ENCSR000DUG.CTCF.Hep-G2 156 bp overlap
ChIP Hep-G2 ENCSR000BIE.CTCF.Hep-G2 149 bp overlap
ChIP Hep-G2 ENCSR000DLS.CTCF.Hep-G2 134 bp overlap
ChIP HepG2 ENCFF127KUP 174 bp overlap
ChIP HepG2 ENCFF194VBQ 174 bp overlap
ChIP HepG2 ENCFF348BUL 164 bp overlap
ChIP HepG2 ENCFF668CTD 124 bp overlap
ChIP HepG2 ENCFF757EKU 140 bp overlap
ChIP K-562 GSE70764.CTCF.K-562 169 bp overlap
ChIP K-562 ENCSR000DMA.CTCF.K-562 132 bp overlap
ChIP K-562_11698 GSE131349.CTCF.K-562_11698 107 bp overlap
ChIP K-562_13004 GSE131349.CTCF.K-562_13004 121 bp overlap
ChIP K-562_14259 GSE131349.CTCF.K-562_14259 120 bp overlap
ChIP K-562_15173 GSE131349.CTCF.K-562_15173 102 bp overlap
ChIP K-562_15776 GSE131349.CTCF.K-562_15776 142 bp overlap
ChIP K-562_7140 GSE131349.CTCF.K-562_7140 147 bp overlap
ChIP K-562_8005 GSE131349.CTCF.K-562_8005 99 bp overlap
ChIP K-562_CRISPRa_N4293 GSE131349.CTCF.K-562_CRISPRa_N4293 122 bp overlap
ChIP K-562_MonoC GSE137216.CTCF.K-562_MonoC 174 bp overlap
ChIP K-562_RF2-insertion GSE140868.CTCF.K-562_RF2-insertion 107 bp overlap
ChIP K-562_WT GSE140868.CTCF.K-562_WT 118 bp overlap
ChIP Kelly_resistant GSE103030.CTCF.Kelly_resistant 160 bp overlap
ChIP Kelly_resistant_JQ1 GSE103030.CTCF.Kelly_resistant_JQ1 110 bp overlap
ChIP Kelly_sensitive GSE103030.CTCF.Kelly_sensitive 152 bp overlap
ChIP LNCaP clone FGC ENCFF957KCI 169 bp overlap
ChIP Loucy ENCSR464DKE.CTCF.Loucy 174 bp overlap
ChIP MCF-7 ENCFF198DQX 174 bp overlap
ChIP MCF-7 ENCFF414SZG 174 bp overlap
ChIP MCF-7 ENCFF424NQR 172 bp overlap
ChIP MCF-7 ENCFF494VXA 174 bp overlap
ChIP MCF-7 ENCFF844STM 172 bp overlap
ChIP MCF-7 ENCFF954TUV 174 bp overlap
ChIP MCF-7 GSE137216.CTCF.MCF-7 174 bp overlap
ChIP MCF-7 ENCSR000DMR.CTCF.MCF-7 174 bp overlap
ChIP MCF-7 ENCSR560BUE.CTCF.MCF-7 173 bp overlap
ChIP MCF-7 GSE70764.CTCF.MCF-7 91 bp overlap
ChIP MCF-7 ERP000380.CTCF.MCF-7 127 bp overlap
ChIP MCF-7 ENCSR000DMS.CTCF.MCF-7 125 bp overlap
ChIP MCF-7 ENCSR000AHD.CTCF.MCF-7 110 bp overlap
ChIP MCF-7L_t24 GSE108787.CTCF.MCF-7L_t24 155 bp overlap
ChIP MCF-7_E2 ERP000380.CTCF.MCF-7_E2 131 bp overlap
ChIP MCF-7_TAM ERP000380.CTCF.MCF-7_TAM 112 bp overlap
ChIP MCF-7_TAM ERP000783.CTCF.MCF-7_TAM 134 bp overlap
ChIP NB4 ENCSR000DWN.CTCF.NB4 159 bp overlap
ChIP NB69 GSE101295.CTCF.NB69 135 bp overlap
ChIP OCI-Ly3 ENCSR756ZKG.CTCF.OCI-Ly3 174 bp overlap
ChIP OVCAR-8 GSE70764.CTCF.OVCAR-8 174 bp overlap
ChIP PC-3 ENCFF487TUI 174 bp overlap
ChIP PC-3 ENCSR359LOD.CTCF.PC-3 174 bp overlap
ChIP Panc1 ENCFF056JQX 174 bp overlap
ChIP RH4 GSE83726.CTCF.RH4 164 bp overlap
ChIP SK-N-AS GSE101295.CTCF.SK-N-AS 157 bp overlap
ChIP SK-N-SH ENCFF731NJX 174 bp overlap
ChIP WA01 ENCSR000DLK.CTCF.WA01 111 bp overlap
ChIP WA01_NEUR GSE52457.CTCF.WA01_NEUR 117 bp overlap
ChIP ZR751 ERP000783.CTCF.ZR751 109 bp overlap
ChIP endodermal cell ENCFF471YCZ 174 bp overlap
ChIP epithelial cell of proximal tubule ENCFF763ZKS 174 bp overlap
ChIP epithelial_kidney ENCSR000DVH.CTCF.epithelial_kidney 174 bp overlap
ChIP epithelial_proximal_tubule ENCSR000DXD.CTCF.epithelial_proximal_tubule 152 bp overlap
ChIP hESC_D0 GSE116862.CTCF.hESC_D0 126 bp overlap
ChIP hESC_NAIVE GSE69646.CTCF.hESC_NAIVE 121 bp overlap
ChIP hiPSC_CVI GSE106870.CTCF.hiPSC_CVI 151 bp overlap
ChIP hiPSC_IB12 GSE106870.CTCF.hiPSC_IB12 153 bp overlap
ChIP hiPSC_failed-genome-editing GSE106870.CTCF.hiPSC_failed-genome-editing 174 bp overlap
ChIP medulloblastoma ENCSR000DMY.CTCF.medulloblastoma 101 bp overlap
ChIP neural progenitor cell ENCFF420RBO 104 bp overlap
ChIP neural_progenitor ENCSR125NBL.CTCF.neural_progenitor 174 bp overlap
ChIP neuron_bipolar_doxy_4d ENCSR619IUE.CTCF.neuron_bipolar_doxy_4d 165 bp overlap
ChIP primary-glioblastoma_G583 GSE121601.CTCF.primary-glioblastoma_G583 139 bp overlap
ChIP thyroid-gland ENCSR033KMZ.CTCF.thyroid-gland 172 bp overlap
ESR1 10 datasets
ChIP MCF-7 GSE119057.ESR1.MCF-7 174 bp overlap
ChIP MCF-7_ER_t10 GSE119057.ESR1.MCF-7_ER_t10 174 bp overlap
ChIP MCF-7_ER_t20 GSE119057.ESR1.MCF-7_ER_t20 173 bp overlap
ChIP MCF-7_ER_t30 GSE119057.ESR1.MCF-7_ER_t30 170 bp overlap
ChIP MCF-7_ER_t40 GSE119057.ESR1.MCF-7_ER_t40 136 bp overlap
ChIP MCF-7_ER_t50 GSE119057.ESR1.MCF-7_ER_t50 174 bp overlap
ChIP MCF-7_ER_t60 GSE119057.ESR1.MCF-7_ER_t60 163 bp overlap
ChIP MCF-7_ER_t70 GSE119057.ESR1.MCF-7_ER_t70 173 bp overlap
ChIP MCF-7_ER_t80 GSE119057.ESR1.MCF-7_ER_t80 146 bp overlap
ChIP MCF-7_ER_t90 GSE119057.ESR1.MCF-7_ER_t90 170 bp overlap
FOXA1 2 datasets
ChIP HepG2 ENCFF207NVJ 174 bp overlap
ChIP MCF-7 GSE140185.FOXA1.MCF-7 146 bp overlap
FOXA2 1 dataset
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA2.pancreatic-progenitor_PP1 158 bp overlap
HSF1 1 dataset
ChIP MO91_CHX_10UM GSE45852.HSF1.MO91_CHX_10UM 133 bp overlap
ONECUT1 3 datasets
ChIP Hep-G2 ENCSR956OSX.ONECUT1.Hep-G2 137 bp overlap
ChIP HepG2 ENCFF243FIR 174 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.ONECUT1.pancreatic-progenitor_PP1 158 bp overlap
POU4F2 1 dataset
ChIP HNPC_DIF GSE74814.POU4F2.HNPC_DIF 125 bp overlap
PPARG 1 dataset
ChIP HUVEC-C_DMSO_HYPO GSE50144.PPARG.HUVEC-C_DMSO_HYPO 119 bp overlap
RAD21 39 datasets
ChIP A-549 ENCSR000BUC.RAD21.A-549 146 bp overlap
ChIP H1 ENCFF698EWO 87 bp overlap
ChIP H1 ENCFF967OJF 174 bp overlap
ChIP HAP1 GSE152721.RAD21.HAP1 174 bp overlap
ChIP HCT-116 ENCSR000BSB.RAD21.HCT-116 172 bp overlap
ChIP HCT-116 GSE131606.RAD21.HCT-116 158 bp overlap
ChIP HCT116 ENCFF568PEO 174 bp overlap
ChIP HUVEC-C_hypoxia GSE94872.RAD21.HUVEC-C_hypoxia 174 bp overlap
ChIP Hep-G2 ENCSR054FKH.RAD21.Hep-G2 174 bp overlap
ChIP Hep-G2 ENCSR000EEG.RAD21.Hep-G2 172 bp overlap
ChIP Hep-G2 ERP000209.RAD21.Hep-G2 168 bp overlap
ChIP HepG2 ENCFF360ZSW 174 bp overlap
ChIP HepG2 ENCFF906QIS 122 bp overlap
ChIP HepG2 ENCFF963UBJ 173 bp overlap
ChIP IMR-5 GSE78957.RAD21.IMR-5 124 bp overlap
ChIP Ishikawa ENCFF570JVV 174 bp overlap
ChIP Ishikawa ENCSR000BTU.RAD21.Ishikawa 161 bp overlap
ChIP K-562 ENCSR000BKV.RAD21.K-562 122 bp overlap
ChIP K-562_RF2-insertion GSE140868.RAD21.K-562_RF2-insertion 174 bp overlap
ChIP MCF-7 ENCFF694KOM 174 bp overlap
ChIP MCF-7 ENCFF724VCQ 174 bp overlap
ChIP MCF-7 ENCSR703TNG.RAD21.MCF-7 166 bp overlap
ChIP MCF-7 GSE72082.RAD21.MCF-7 150 bp overlap
ChIP MCF-7 GSE137216.RAD21.MCF-7 149 bp overlap
ChIP MCF-7 ENCSR000BTQ.RAD21.MCF-7 145 bp overlap
ChIP MCF-7 ERP000209.RAD21.MCF-7 140 bp overlap
ChIP MCF-7_E2 ERP000209.RAD21.MCF-7_E2 161 bp overlap
ChIP RH4 GSE83726.RAD21.RH4 158 bp overlap
ChIP SK-N-SH ENCSR000EHX.RAD21.SK-N-SH 134 bp overlap
ChIP THP-1_Pam3csk-020m-Flavo-000m GSE103477.RAD21.THP-1_Pam3csk-020m-Flavo-000m 91 bp overlap
ChIP THP-1_Pam3csk-150m-Flavo-030m GSE103477.RAD21.THP-1_Pam3csk-150m-Flavo-030m 117 bp overlap
ChIP WA09 GSE105028.RAD21.WA09 174 bp overlap
ChIP WA09_heat-shock GSE105028.RAD21.WA09_heat-shock 174 bp overlap
ChIP hiPSC_IB12 GSE106870.RAD21.hiPSC_IB12 131 bp overlap
ChIP hiPSC_IIA12 GSE106870.RAD21.hiPSC_IIA12 95 bp overlap
ChIP hiPSC_IIIB12 GSE106870.RAD21.hiPSC_IIIB12 174 bp overlap
ChIP hiPSC_IV8 GSE106870.RAD21.hiPSC_IV8 171 bp overlap
ChIP hiPSC_failed-genome-editing GSE106870.RAD21.hiPSC_failed-genome-editing 154 bp overlap
ChIP hiPSC_parental-line GSE106870.RAD21.hiPSC_parental-line 169 bp overlap
SMC1 1 dataset
ChIP HCT-116_RAD21-mAC GSE104888.SMC1.HCT-116_RAD21-mAC 146 bp overlap
SMC1A 1 dataset
ChIP Hep-G2 GSE76893.SMC1A.Hep-G2 167 bp overlap
SMC3 1 dataset
ChIP HepG2 ENCFF745UAV 174 bp overlap
STAG1 7 datasets
ChIP HeLa GSE126990.STAG1.HeLa 174 bp overlap
ChIP HeLa-Kyoto GSE138405.STAG1.HeLa-Kyoto 174 bp overlap
ChIP Hep-G2 ENCSR167MTG.STAG1.Hep-G2 174 bp overlap
ChIP Hep-G2 ERP000209.STAG1.Hep-G2 174 bp overlap
ChIP HepG2 ENCFF843EBZ 104 bp overlap
ChIP MCF-7 ERP000209.STAG1.MCF-7 174 bp overlap
ChIP MCF-7_E2 ERP000209.STAG1.MCF-7_E2 160 bp overlap
STAG2 2 datasets
ChIP HCAEC GSE101921.STAG2.HCAEC 119 bp overlap
ChIP HL-60 GSE131577.STAG2.HL-60 111 bp overlap
ZBTB2 1 dataset
ChIP Hep-G2 GSE97661.ZBTB2.Hep-G2 174 bp overlap
ZNF654 2 datasets
ChIP HEK293 ENCFF636WIC 174 bp overlap
ChIP HEK293 ENCSR504VDV.ZNF654.HEK293 161 bp overlap
Huangfu Lab · Publications · Resources · Contact