chr13 : 58,476,144 58,476,533
389 bp 33 TFs 0 linked genes
This 389 bp open chromatin element has no linked target genes and is bound by 33 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr13:58,471,144 – 58,481,533
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
33 transcription factors
Source
Cell type
Ar 1 dataset
Motif ES_0h ES_0h-Ar_MA0007.4 16 bp overlap
CHD7 1 dataset
ChIP hiPSC_derived_lt-NES GSE108506.CHD7.hiPSC_derived_lt-NES 158 bp overlap
CTCF 2 datasets
ChIP GM23338 ENCFF772DML 201 bp overlap
ChIP neuron_bipolar_doxy_4d ENCSR619IUE.CTCF.neuron_bipolar_doxy_4d 96 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 282 bp overlap
EP300 1 dataset
ChIP neural ENCSR843ZUP.EP300.neural 168 bp overlap
ESR1 1 dataset
ChIP MCF-7_TAMR_TAM ERP000380.ESR1.MCF-7_TAMR_TAM 132 bp overlap
ETV6 1 dataset
ChIP GM12878 ENCSR626VUC.ETV6.GM12878 138 bp overlap
GATA4 2 datasets
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 61 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 270 bp overlap
GATA6 11 datasets
ChIP DE DE-GATA6-2 247 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 389 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 389 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 230 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 244 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 389 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 389 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 253 bp overlap
ChIP foregut_KO GSE117136.GATA6.foregut_KO 362 bp overlap
ChIP pancreatic-progenitor_KO GSE117136.GATA6.pancreatic-progenitor_KO 344 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA6.pancreatic-progenitor_PP1 235 bp overlap
GRHL2 1 dataset
Motif ES_0h ES_0h-GRHL2_MA1105.3 8 bp overlap
JUN 2 datasets
ChIP DE_D2 S02-DE-d2-JUN-exp1 342 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 245 bp overlap
MEIS1 1 dataset
Motif ES_0h ES_0h-MEIS1_MA0498.3 5 bp overlap
MEIS3 1 dataset
Motif ES_0h ES_0h-MEIS3_MA0775.2 7 bp overlap
Msgn1 1 dataset
Motif ES_0h ES_0h-Msgn1_MA1524.3 10 bp overlap
NANOG 2 datasets
ChIP HUES-8 GSE109524.NANOG.HUES-8 274 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 232 bp overlap
PDX1 1 dataset
ChIP hiPSC GSE125768.PDX1.hiPSC 276 bp overlap
RAD21 3 datasets
ChIP H1 ENCFF698EWO 241 bp overlap
ChIP H1 ENCFF967OJF 245 bp overlap
ChIP hiPSC_CVI GSE106870.RAD21.hiPSC_CVI 199 bp overlap
RARA 1 dataset
ChIP hiPSC_D4 GSE109172.RARA.hiPSC_D4 355 bp overlap
RBPJ 1 dataset
Motif ES_0h ES_0h-RBPJ_MA1116.2 6 bp overlap
SMAD1 1 dataset
ChIP BG03 GSE36578.SMAD1.BG03 96 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 356 bp overlap
SMAD4 1 dataset
ChIP Caco-2 GSE112946.SMAD4.Caco-2 123 bp overlap
SMARCA4 3 datasets
ChIP NPC_siSOX GSE122631.SMARCA4.NPC_siSOX 219 bp overlap
ChIP hiPSC GSE124903.SMARCA4.hiPSC 333 bp overlap
ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 288 bp overlap
T 1 dataset
ChIP H9_MESODERM GSE60606.T.H9_MESODERM 303 bp overlap
ZNF667 2 datasets
Motif DE_12h DE_12h-ZNF667_MA1984.2 11 bp overlap
Motif ES_0h ES_0h-ZNF667_MA1984.2 11 bp overlap
ZNF816 1 dataset
Motif ES_0h ES_0h-ZNF816_MA1719.2 15 bp overlap
Zfp809 1 dataset
Motif ES_0h ES_0h-Zfp809_MA2125.1 9 bp overlap
Zic2 1 dataset
Motif ES_0h ES_0h-Zic2_MA1629.2 9 bp overlap
Zic3 1 dataset
Motif ES_0h ES_0h-Zic3_MA0697.3 7 bp overlap