chr13 : 40,210,750 40,211,538
788 bp 30 TFs 2 linked genes
This 788 bp open chromatin element is linked to LINC00598 and FOXO1 and is bound by 30 transcription factors.
Linked Genes
2 genes
Link type
Gene Expression Dist. to TSS Distance Link type
LINC00598 62.3 kb Distal Multiome
FOXO1 455.5 kb Distal Multiome+HiCAR
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr13:40,205,750 – 40,216,538
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
30 transcription factors
Source
Cell type
BRD4 3 datasets
ChIP HEK293T GSE39579.BRD4.HEK293T 107 bp overlap
ChIP MDA-MB-157 ERP003925.BRD4.MDA-MB-157 316 bp overlap
ChIP SUM159PT_100nMtrametinib_24h GSE87418.BRD4.SUM159PT_100nMtrametinib_24h 503 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 566 bp overlap
FEZF1 3 datasets
ChIP HEK293 ENCFF528YED 261 bp overlap
ChIP HEK293 ENCSR827NWO.FEZF1.HEK293 518 bp overlap
ChIP HEK293 GSE76494.FEZF1.HEK293 141 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 629 bp overlap
ChIP DE DE-FOXA2-2 578 bp overlap
GATA4 5 datasets
ChIP DE DE-GATA4-1 581 bp overlap
ChIP DE DE-GATA4-2 619 bp overlap
ChIP Hep-G2 GSE135714.GATA4.Hep-G2 298 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 263 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 252 bp overlap
GATA6 7 datasets
ChIP AGS GSE51936.GATA6.AGS 85 bp overlap
ChIP DE DE-GATA6-1 595 bp overlap
ChIP DE DE-GATA6-2 603 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 301 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 588 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 263 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 415 bp overlap
HNRNPK 6 datasets
ChIP Hep-G2 GSE120104.HNRNPK.Hep-G2 407 bp overlap
ChIP Hep-G2 ENCSR519QAA.HNRNPK.Hep-G2 367 bp overlap
ChIP HepG2 ENCFF493GNS 186 bp overlap
ChIP HepG2 ENCFF826MXP 201 bp overlap
ChIP K-562 ENCSR014RCS.HNRNPK.K-562 257 bp overlap
ChIP K-562 GSE120104.HNRNPK.K-562 258 bp overlap
IKZF3 1 dataset
ChIP HEK293 ENCSR304AMN.IKZF3.HEK293 243 bp overlap
MAZ 1 dataset
ChIP HEK293 ENCSR290SSQ.MAZ.HEK293 89 bp overlap
NCAPH2 1 dataset
ChIP RMG-I_ARID1A-KO GSE120058.NCAPH2.RMG-I_ARID1A-KO 211 bp overlap
PCBP1 4 datasets
ChIP Hep-G2 GSE120104.PCBP1.Hep-G2 237 bp overlap
ChIP Hep-G2 ENCSR872EVQ.PCBP1.Hep-G2 231 bp overlap
ChIP HepG2 ENCFF447SRJ 406 bp overlap
ChIP HepG2 ENCFF604TPT 404 bp overlap
PCBP2 2 datasets
ChIP Hep-G2 ENCSR945NSF.PCBP2.Hep-G2 231 bp overlap
ChIP Hep-G2 GSE120104.PCBP2.Hep-G2 231 bp overlap
POU5F1 1 dataset
ChIP BJ_INDUCED GSE36570.POU5F1.BJ_INDUCED 132 bp overlap
PRDM1 2 datasets
ChIP HEK293 ENCFF302TBP 109 bp overlap
ChIP HEK293 GSE76494.PRDM1.HEK293 189 bp overlap
PRDM6 3 datasets
ChIP HEK293 ENCFF283AJL 243 bp overlap
ChIP HEK293 ENCSR892QHR.PRDM6.HEK293 328 bp overlap
ChIP HEK293 GSE76494.PRDM6.HEK293 231 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 440 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 241 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 547 bp overlap
T 1 dataset
ChIP H9_MESODERM GSE60606.T.H9_MESODERM 220 bp overlap
YY1 1 dataset
ChIP Hep-G2_RBM25-KD GSE120104.YY1.Hep-G2_RBM25-KD 408 bp overlap
ZBTB6 3 datasets
ChIP HEK293 ENCFF881ECZ 157 bp overlap
ChIP HEK293 ENCSR619OUC.ZBTB6.HEK293 277 bp overlap
ChIP HEK293 GSE76494.ZBTB6.HEK293 277 bp overlap
ZNF324 1 dataset
ChIP HEK293 GSE76494.ZNF324.HEK293 325 bp overlap
ZNF35 1 dataset
ChIP HEK293 GSE76494.ZNF35.HEK293 196 bp overlap
ZNF41 1 dataset
ChIP HEK293 GSE76494.ZNF41.HEK293 149 bp overlap
ZNF467 1 dataset
ChIP HEK293 GSE76494.ZNF467.HEK293 300 bp overlap
ZNF629 2 datasets
ChIP HEK293 ENCFF096ELQ 525 bp overlap
ChIP HEK293 ENCSR351NON.ZNF629.HEK293 359 bp overlap