chr13 : 34,772,060 – 34,772,519
459 bp 22 TFs 0 linked genes
This 459 bp open chromatin element has no linked target genes and is bound by 22 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr13:34,767,060 – 34,777,519
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
22 transcription factors
Source
Cell type
BRD4 1 dataset
ChIP Kelly_sensitive GSE103030.BRD4.Kelly_sensitive 222 bp overlap
CDX2 4 datasets
ChIP COLO-320 GSE30026.CDX2.COLO-320 98 bp overlap
ChIP LS180 GSE31939.CDX2.LS180 263 bp overlap
ChIP LS180_125 GSE31939.CDX2.LS180_125 233 bp overlap
ChIP intestinal-cell GSE115314.CDX2.intestinal-cell 208 bp overlap
CTNNB1 2 datasets
ChIP LS180 GSE31939.CTNNB1.LS180 206 bp overlap
ChIP LS180_125 GSE31939.CTNNB1.LS180_125 221 bp overlap
FOXA1 3 datasets
ChIP LS180 GSE140533.FOXA1.LS180 110 bp overlap
ChIP breast-cancer_Veh-2856 GSE128018.FOXA1.breast-cancer_Veh-2856 154 bp overlap
ChIP breast-cancer_Veh-2856 GSE128018.FOXA1.breast-cancer_Veh-2856 218 bp overlap
FOXA2 3 datasets
ChIP BJ1-hTERT_FOXA2_GATA4_Coexp GSE92491.FOXA2.BJ1-hTERT_FOXA2_GATA4_Coexp 212 bp overlap
ChIP DE DE-FOXA2-1 404 bp overlap
ChIP DE DE-FOXA2-2 393 bp overlap
GATA2 1 dataset
ChIP WA09 GSE105081.GATA2.WA09 145 bp overlap
GATA3 3 datasets
ChIP Kelly GSE65664.GATA3.Kelly 302 bp overlap
ChIP Kelly GSE94822.GATA3.Kelly 260 bp overlap
ChIP SK-N-BE2-C GSE94822.GATA3.SK-N-BE2-C 236 bp overlap
GATA4 5 datasets
ChIP DE DE-GATA4-1 457 bp overlap
ChIP DE DE-GATA4-2 459 bp overlap
ChIP foregut GSE117136.GATA4.foregut 407 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 360 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 360 bp overlap
GATA6 13 datasets
ChIP Caco-2_PROLIF GSE23436.GATA6.Caco-2_PROLIF 309 bp overlap
ChIP DE DE-GATA6-1 459 bp overlap
ChIP DE DE-GATA6-2 438 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 383 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 425 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 440 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 390 bp overlap
ChIP ESO-26 GSE132680.GATA6.ESO-26 193 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 459 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 444 bp overlap
ChIP foregut GSE117136.GATA6.foregut 273 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA6.pancreatic-progenitor 305 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA6.pancreatic-progenitor_PP1 273 bp overlap
HAND2 1 dataset
ChIP Kelly GSE94822.HAND2.Kelly 131 bp overlap
ISL1 1 dataset
ChIP SK-N-BE2-C GSE94822.ISL1.SK-N-BE2-C 251 bp overlap
MYC 1 dataset
ChIP GP5D GSE51234.MYC.GP5D 239 bp overlap
NIPBL 1 dataset
ChIP GP5D GSE51234.NIPBL.GP5D 353 bp overlap
PHOX2B 1 dataset
ChIP CLB-Ga GSE90683.PHOX2B.CLB-Ga 203 bp overlap
RAD21 1 dataset
ChIP GP5D GSE51234.RAD21.GP5D 168 bp overlap
RXR 1 dataset
ChIP LS180 GSE31939.RXR.LS180 249 bp overlap
SMAD2-3 3 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 357 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 342 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 303 bp overlap
SMAD2_3 1 dataset
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 221 bp overlap
SMC3 1 dataset
ChIP GP5D GSE51234.SMC3.GP5D 242 bp overlap
TBX2 1 dataset
ChIP Kelly GSE94822.TBX2.Kelly 211 bp overlap
TCF4 2 datasets
ChIP LS180 GSE31939.TCF4.LS180 215 bp overlap
ChIP LS180_125 GSE31939.TCF4.LS180_125 190 bp overlap
TFAP2A 1 dataset
ChIP WA09 GSE105081.TFAP2A.WA09 244 bp overlap
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