chr1 : 214,545,289 214,545,916
627 bp 29 TFs 1 linked gene
This 627 bp open chromatin element is linked to PTPN14 and is bound by 29 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
PTPN14 5.7 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr1:214,540,289 – 214,550,916
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
29 transcription factors
Source
Cell type
AR 1 dataset
ChIP LNCaP_FOXA1 ERP003503.AR.LNCaP_FOXA1 160 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF335XTP 131 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 189 bp overlap
ERG 1 dataset
ChIP Jurkat GSE49091.ERG.Jurkat 134 bp overlap
FEZF1 2 datasets
ChIP HEK293 ENCFF528YED 134 bp overlap
ChIP HEK293 ENCSR827NWO.FEZF1.HEK293 281 bp overlap
FOS 2 datasets
ChIP HCT-116_A7A GSE152144.FOS.HCT-116_A7A 209 bp overlap
ChIP HCT-116_A7A GSE152144.FOS.HCT-116_A7A 228 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 627 bp overlap
ChIP DE DE-FOXA2-2 593 bp overlap
GATA4 4 datasets
ChIP DE DE-GATA4-1 627 bp overlap
ChIP DE DE-GATA4-2 627 bp overlap
ChIP foregut GSE117136.GATA4.foregut 357 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 415 bp overlap
GATA6 12 datasets
ChIP Caco-2_PROLIF GSE23436.GATA6.Caco-2_PROLIF 131 bp overlap
ChIP DE DE-GATA6-1 627 bp overlap
ChIP DE DE-GATA6-2 627 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 455 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 513 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 627 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 627 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 580 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 627 bp overlap
ChIP YCC-3 GSE51705.GATA6.YCC-3 205 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 529 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA6.pancreatic-progenitor_PP1 266 bp overlap
GFI1B 1 dataset
ChIP HEK293 ENCSR445PDR.GFI1B.HEK293 211 bp overlap
HOXB13 1 dataset
ChIP G-401 GSE65381.HOXB13.G-401 384 bp overlap
IKZF3 2 datasets
ChIP HEK293 ENCFF518OXG 371 bp overlap
ChIP HEK293 ENCSR304AMN.IKZF3.HEK293 249 bp overlap
OSR2 1 dataset
ChIP HEK293 ENCSR324LTM.OSR2.HEK293 221 bp overlap
POLR2A 2 datasets
ChIP H1 ENCFF566JSR 290 bp overlap
ChIP Panc1 ENCFF290KAB 305 bp overlap
PRDM10 1 dataset
ChIP HEK293 ENCFF145WQQ 205 bp overlap
PRDM6 2 datasets
ChIP HEK293 ENCFF283AJL 266 bp overlap
ChIP HEK293 ENCSR892QHR.PRDM6.HEK293 327 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 385 bp overlap
SMAD2_3 2 datasets
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 361 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 316 bp overlap
SMARCA4 1 dataset
ChIP endometrial-epithelial-cells_KO GSE106660.SMARCA4.endometrial-epithelial-cells_KO 463 bp overlap
SMARCC1 2 datasets
ChIP HS-SY-2 GSE108025.SMARCC1.HS-SY-2 64 bp overlap
ChIP HS-SY-2 GSE108025.SMARCC1.HS-SY-2 421 bp overlap
SP7 1 dataset
ChIP HEK293 ENCSR468IJT.SP7.HEK293 206 bp overlap
TP63 4 datasets
ChIP SUIT-2 GSE115461.TP63.SUIT-2 251 bp overlap
ChIP keratinocyte_D2 GSE59824.TP63.keratinocyte_D2 192 bp overlap
ChIP keratinocyte_D4 GSE59824.TP63.keratinocyte_D4 197 bp overlap
ChIP keratinocyte_D7 GSE59824.TP63.keratinocyte_D7 219 bp overlap
WT1 1 dataset
ChIP HEK293 ENCFF906HIR 425 bp overlap
ZNF18 2 datasets
ChIP HEK293 ENCFF066NGR 404 bp overlap
ChIP HEK293 ENCSR977HTH.ZNF18.HEK293 292 bp overlap
ZNF19 1 dataset
ChIP HEK293 ENCFF811PGJ 345 bp overlap
ZNF580 2 datasets
ChIP HEK293 ENCFF906MQV 397 bp overlap
ChIP HEK293 ENCSR668HOP.ZNF580.HEK293 456 bp overlap
ZNF843 2 datasets
ChIP HEK293 ENCFF241QRH 209 bp overlap
ChIP HEK293 ENCSR502KPJ.ZNF843.HEK293 312 bp overlap
ZXDB 1 dataset
ChIP HEK293 ENCSR559IOZ.ZXDB.HEK293 364 bp overlap