chr12 : 95,538,674 95,538,950
276 bp 32 TFs 1 linked gene
This 276 bp open chromatin element is linked to USP44 and is bound by 32 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
USP44 9.9 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr12:95,533,674 – 95,543,950
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
32 transcription factors
Source
Cell type
ASH2L 1 dataset
ChIP WA01 ENCSR850KIP.ASH2L.WA01 206 bp overlap
EBF1 1 dataset
ChIP NALM-6 GSE126300.EBF1.NALM-6 202 bp overlap
EZH1 1 dataset
ChIP ProEs GSE59087.EZH1.ProEs 139 bp overlap
GATA4 2 datasets
ChIP DE DE-GATA4-1 70 bp overlap
ChIP DE DE-GATA4-2 53 bp overlap
GATA6 7 datasets
ChIP DE DE-GATA6-1 61 bp overlap
ChIP DE DE-GATA6-2 180 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 59 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 238 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 56 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 141 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 140 bp overlap
IKZF1 1 dataset
ChIP pre-B-cell GSE107886.IKZF1.pre-B-cell 276 bp overlap
IKZF3 1 dataset
ChIP pre-B-cell GSE107886.IKZF3.pre-B-cell 236 bp overlap
JUN 1 dataset
ChIP DE_D1 S40-DE-d1-JUN-exp2 86 bp overlap
KMT2A 2 datasets
ChIP HEK293T_N-term_C104 GSE90762.KMT2A.HEK293T_N-term_C104 276 bp overlap
ChIP HEK293T_N-term_C49 GSE90762.KMT2A.HEK293T_N-term_C49 276 bp overlap
MTA2 1 dataset
ChIP pre-B-cell GSE107886.MTA2.pre-B-cell 213 bp overlap
NANOG 6 datasets
ChIP HUES-8 GSE109524.NANOG.HUES-8 276 bp overlap
ChIP WA01 ERP004238.NANOG.WA01 276 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 241 bp overlap
ChIP WA09 GSE105028.NANOG.WA09 241 bp overlap
ChIP WA09_heat-shock GSE105028.NANOG.WA09_heat-shock 210 bp overlap
ChIP hESC GSE18292.NANOG.hESC 101 bp overlap
NEUROD1 3 datasets
ChIP D283-Med GSE92582.NEUROD1.D283-Med 276 bp overlap
ChIP D283-Med_shNEUROD1-1579 GSE92582.NEUROD1.D283-Med_shNEUROD1-1579 86 bp overlap
ChIP D341-Med_shNEUROD1-1154 GSE92582.NEUROD1.D341-Med_shNEUROD1-1154 91 bp overlap
NIPBL 2 datasets
ChIP hESC_WNT3A_ACTIVIN GSE64758.NIPBL.hESC_WNT3A_ACTIVIN 276 bp overlap
ChIP hESC_activin GSE64758.NIPBL.hESC_activin 175 bp overlap
PBX1 1 dataset
ChIP RCH-ACV GSE85988.PBX1.RCH-ACV 276 bp overlap
PHIP 1 dataset
ChIP HEK293_ab833 GSE101646.PHIP.HEK293_ab833 164 bp overlap
POLR2A 1 dataset
ChIP H1 ENCFF566JSR 276 bp overlap
POU5F1 5 datasets
ChIP BG03 GSE21614.POU5F1.BG03 156 bp overlap
ChIP HUES-8 GSE109524.POU5F1.HUES-8 276 bp overlap
ChIP NCCIT_SNF5 GSE36134.POU5F1.NCCIT_SNF5 276 bp overlap
ChIP hESC_PRIMED GSE69646.POU5F1.hESC_PRIMED 276 bp overlap
ChIP hiPSC GSE56567.POU5F1.hiPSC 139 bp overlap
SIN3A 1 dataset
ChIP hiPSC_IB12 GSE106870.SIN3A.hiPSC_IB12 175 bp overlap
SMAD2 1 dataset
ChIP hESC_YAP-_activinA_15h GSE99202.SMAD2.hESC_YAP-_activinA_15h 181 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 145 bp overlap
SMARCA4 4 datasets
ChIP BIN-67_lentivirus-SMARCA4-T910M GSE117734.SMARCA4.BIN-67_lentivirus-SMARCA4-T910M 86 bp overlap
ChIP NSC GSE125033.SMARCA4.NSC 226 bp overlap
ChIP hiPSC GSE124903.SMARCA4.hiPSC 276 bp overlap
ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 248 bp overlap
SOX2 1 dataset
ChIP hiPSC GSE56567.SOX2.hiPSC 264 bp overlap
SP4 1 dataset
ChIP HEK293 GSE76494.SP4.HEK293 173 bp overlap
TCF3 1 dataset
ChIP RCH-ACV GSE85988.TCF3.RCH-ACV 262 bp overlap
ZBTB48 2 datasets
ChIP HEK293 ENCFF809BPK 268 bp overlap
ChIP HEK293 ENCSR781EQJ.ZBTB48.HEK293 165 bp overlap
ZBTB7A 2 datasets
ChIP HUDEP-2 GSE103445.ZBTB7A.HUDEP-2 227 bp overlap
ChIP K-562 GSE103445.ZBTB7A.K-562 202 bp overlap
ZNF257 1 dataset
ChIP HEK293T GSE78099.ZNF257.HEK293T 155 bp overlap