Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

20 transcription factors

BRD4 3 datasets

ChIP cortical-interneuron_KCl-pos_JQ1-neg GSE117508.BRD4.cortical-interneuron_KCl-pos_JQ1-neg 222 bp overlap

ChIP cortical-interneuron_R133C_KCl-pos_JQ1-pos GSE117508.BRD4.cortical-interneuron_R133C_KCl-pos_JQ1-pos 212 bp overlap

ChIP retina_AB1-FW15 GSE86981.BRD4.retina_AB1-FW15 604 bp overlap

CTCF 3 datasets

ChIP 22Rv1_hydroxy_10nM_4h ENCSR847XGE.CTCF.22Rv1_hydroxy_10nM_4h 74 bp overlap

ChIP K-562_MonoC GSE137216.CTCF.K-562_MonoC 82 bp overlap

ChIP K-562_RabbitC GSE137216.CTCF.K-562_RabbitC 54 bp overlap

Cebpa 2 datasets

ChIP BLaER1 ENCFF274GAT 266 bp overlap

ChIP BLaER1 ENCFF364PUR 201 bp overlap

EP300 1 dataset

ChIP neural ENCSR843ZUP.EP300.neural 151 bp overlap

ETS1 2 datasets

ChIP HUVEC-C_4h GSE93030.ETS1.HUVEC-C_4h 122 bp overlap

ChIP HUVEC-C_VEGF_4h GSE109625.ETS1.HUVEC-C_VEGF_4h 122 bp overlap

EZH2 2 datasets

ChIP A-1847 GSE95643.EZH2.A-1847 265 bp overlap

ChIP SU-DHL-6 GSE134136.EZH2.SU-DHL-6 260 bp overlap

GATA4 1 dataset

ChIP DE DE-GATA4-2 473 bp overlap

GATA6 4 datasets

ChIP DE DE-GATA6-1 268 bp overlap

ChIP DE DE-GATA6-2 349 bp overlap

ChIP DE_D2 S55-DE-d2-GATA6-exp2 366 bp overlap

ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 348 bp overlap

KDM3A 1 dataset

ChIP 22Rv1_shKDM3A GSE109748.KDM3A.22Rv1_shKDM3A 161 bp overlap

MXI1 1 dataset

ChIP neural ENCSR934NHU.MXI1.neural 266 bp overlap

NEUROD1 2 datasets

ChIP D283-Med GSE92582.NEUROD1.D283-Med 539 bp overlap

ChIP D283-Med_shNEUROD1-1579 GSE92582.NEUROD1.D283-Med_shNEUROD1-1579 360 bp overlap

PLAG1 1 dataset

ChIP K-562 GSE111469.PLAG1.K-562 187 bp overlap

POLR2A 1 dataset

ChIP neural cell ENCFF604SPB 69 bp overlap

REST 3 datasets

ChIP neural ENCSR000BTV.REST.neural 151 bp overlap

ChIP neural cell ENCFF882LXX 303 bp overlap

ChIP neural cell ENCFF882LXX 505 bp overlap

SMAD2-3 2 datasets

ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 579 bp overlap

ChIP HUVEC-C_TGFB1 GSE134556.SMAD2-3.HUVEC-C_TGFB1 55 bp overlap

SMC3 1 dataset

ChIP neural ENCSR404BPV.SMC3.neural 460 bp overlap

SOX17 1 dataset

ChIP DE_D2 DED2-SOX17_Batch_II 366 bp overlap

SOX17_M 1 dataset

ChIP DE_D2 DED2-SOX17-M_Batch_II 715 bp overlap

ZMYM3 1 dataset

ChIP K562 ENCFF361LXT 61 bp overlap

ZNF3 1 dataset

ChIP K-562 ENCSR195QFV.ZNF3.K-562 177 bp overlap

Gene	Dist. to TSS	Distance	Link type
MIR29B2CHG	172.0 kb	Distal	Multiome
PLXNA2	203.2 kb	Distal	Multiome+HiCAR
CD46	289.1 kb	Distal	Multiome

Genome Browser