chr12 : 22,803,825 – 22,804,227
402 bp 36 TFs 0 linked genes
This 402 bp open chromatin element has no linked target genes and is bound by 36 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr12:22,798,825 – 22,809,227
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
36 transcription factors
Source
Cell type
ASH2L 1 dataset
ChIP WA01 ENCSR850KIP.ASH2L.WA01 342 bp overlap
Ahr::Arnt 1 dataset
Motif DE_12h DE_12h-AhrArnt_MA0006.2 5 bp overlap
BRD4 2 datasets
ChIP 22Rv1_DHT-ABBV-744 GSE118247.BRD4.22Rv1_DHT-ABBV-744 205 bp overlap
ChIP HEK293_Ctrl GSE129407.BRD4.HEK293_Ctrl 283 bp overlap
CREB1 1 dataset
ChIP A-549 ENCSR000BRA.CREB1.A-549 128 bp overlap
CTCF 148 datasets
ChIP 22Rv1 ENCFF466OXN 402 bp overlap
ChIP 786-O_NORMOXIA GSE78113.CTCF.786-O_NORMOXIA 218 bp overlap
ChIP A-549 ENCSR000DPF.CTCF.A-549 185 bp overlap
ChIP A-549 ENCSR000DNA.CTCF.A-549 110 bp overlap
ChIP A-673 ENCSR611JJS.CTCF.A-673 158 bp overlap
ChIP A549 ENCFF182TCQ 175 bp overlap
ChIP BE2C ENCFF757SRF 219 bp overlap
ChIP BE2C ENCSR000DQD.CTCF.BE2C 154 bp overlap
ChIP C4-2B ENCFF821XVN 402 bp overlap
ChIP C4-2B ENCFF821XVN 402 bp overlap
ChIP Caco-2 ENCFF753NZV 333 bp overlap
ChIP Caco-2 ENCFF934QYS 169 bp overlap
ChIP Caco-2 ENCSR000DQN.CTCF.Caco-2 103 bp overlap
ChIP D54 ENCSR000DKN.CTCF.D54 213 bp overlap
Motif DE_12h DE_12h-CTCF_MA0139.2 15 bp overlap
ChIP GM04025_B-lymphocytes GSE111170.CTCF.GM04025_B-lymphocytes 160 bp overlap
ChIP GM04648 GSE148179.CTCF.GM04648 131 bp overlap
ChIP GM09236__B-lymphocytes GSE111170.CTCF.GM09236__B-lymphocytes 104 bp overlap
ChIP GM23338 ENCFF531QOI 155 bp overlap
ChIP GM23338 ENCFF772DML 111 bp overlap
ChIP H1 ENCFF230QSV 160 bp overlap
ChIP H1 ENCFF414GZI 187 bp overlap
ChIP H1 ENCFF764RHO 114 bp overlap
ChIP H54 ENCFF255TVO 173 bp overlap
ChIP H9 ENCFF152GTF 243 bp overlap
ChIP HAP1 GSE152721.CTCF.HAP1 200 bp overlap
ChIP HAP1_2kb GSE152721.CTCF.HAP1_2kb 178 bp overlap
ChIP HAP1_WT GSE126634.CTCF.HAP1_WT 187 bp overlap
ChIP HAP1_WaplKO-33 GSE94992.CTCF.HAP1_WaplKO-33 99 bp overlap
ChIP HAP1_clone21 GSE152721.CTCF.HAP1_clone21 187 bp overlap
ChIP HAP1_clone21_CTCF-CRISPR GSE152721.CTCF.HAP1_clone21_CTCF-CRISPR 205 bp overlap
ChIP HAP1_clone21_CTCF-TSS-CRISPR_1 GSE152721.CTCF.HAP1_clone21_CTCF-TSS-CRISPR_1 246 bp overlap
ChIP HAP1_clone21_CTCF-TSS-CRISPR_2 GSE152721.CTCF.HAP1_clone21_CTCF-TSS-CRISPR_2 199 bp overlap
ChIP HAP1_clone21_TSS-CRISPR GSE152721.CTCF.HAP1_clone21_TSS-CRISPR 130 bp overlap
ChIP HAP1_clone25 GSE152721.CTCF.HAP1_clone25 187 bp overlap
ChIP HCT-116 ENCSR240PRQ.CTCF.HCT-116 200 bp overlap
ChIP HCT-116 GSE131606.CTCF.HCT-116 346 bp overlap
ChIP HCT-116 ENCSR000DTO.CTCF.HCT-116 183 bp overlap
ChIP HCT-116_RAD21-mAC GSE104888.CTCF.HCT-116_RAD21-mAC 186 bp overlap
ChIP HCT116 ENCFF209YMI 220 bp overlap
ChIP HEK293 ENCFF498RMM 214 bp overlap
ChIP HEK293 ENCSR000DTW.CTCF.HEK293 145 bp overlap
ChIP HEK293T GSE115862.CTCF.HEK293T 147 bp overlap
ChIP HeLa-Kyoto_PDS5-depleted GSE102884.CTCF.HeLa-Kyoto_PDS5-depleted 171 bp overlap
ChIP HeLa-Kyoto_WAPL-depleted GSE102884.CTCF.HeLa-Kyoto_WAPL-depleted 131 bp overlap
ChIP HeLa-S3 ENCSR000AOA.CTCF.HeLa-S3 215 bp overlap
ChIP HeLa-S3 ENCSR000DUB.CTCF.HeLa-S3 164 bp overlap
ChIP HeLa-S3 ENCSR000DLO.CTCF.HeLa-S3 88 bp overlap
ChIP HeLa-S3_biotin GSE108869.CTCF.HeLa-S3_biotin 220 bp overlap
ChIP HeLa-S3_shCtrl GSE137848.CTCF.HeLa-S3_shCtrl 155 bp overlap
ChIP HeLa_dC9Sun-D3A_MIR152 GSE107607.CTCF.HeLa_dC9Sun-D3A_MIR152 135 bp overlap
ChIP Hep-G2 ERP000209.CTCF.Hep-G2 119 bp overlap
ChIP Hep-G2 ENCSR000BIE.CTCF.Hep-G2 127 bp overlap
ChIP Hep-G2 ENCSR000DUG.CTCF.Hep-G2 143 bp overlap
ChIP Hep-G2 ENCSR000DLS.CTCF.Hep-G2 81 bp overlap
ChIP HepG2 ENCFF348BUL 181 bp overlap
ChIP K-562 ENCSR000AKO.CTCF.K-562 150 bp overlap
ChIP K-562 GSE70764.CTCF.K-562 211 bp overlap
ChIP K-562 ENCSR000DMA.CTCF.K-562 152 bp overlap
ChIP K-562 ENCSR000BPJ.CTCF.K-562 156 bp overlap
ChIP K-562 ENCSR000DWE.CTCF.K-562 147 bp overlap
ChIP K-562_14259 GSE131349.CTCF.K-562_14259 97 bp overlap
ChIP K-562_14376 GSE131349.CTCF.K-562_14376 144 bp overlap
ChIP K-562_15776 GSE131349.CTCF.K-562_15776 128 bp overlap
ChIP K-562_7140 GSE131349.CTCF.K-562_7140 132 bp overlap
ChIP K-562_MonoN GSE137216.CTCF.K-562_MonoN 174 bp overlap
ChIP K-562_dCas9-KRAB GSE132212.CTCF.K-562_dCas9-KRAB 110 bp overlap
ChIP K-562_dCas9-LSD1 GSE132212.CTCF.K-562_dCas9-LSD1 144 bp overlap
ChIP K-562_enCRISPRi-KL GSE132212.CTCF.K-562_enCRISPRi-KL 122 bp overlap
ChIP K-562_enCRISPRi-LK GSE132212.CTCF.K-562_enCRISPRi-LK 171 bp overlap
ChIP K562 ENCFF082GOI 185 bp overlap
ChIP K562 ENCFF111MGE 210 bp overlap
ChIP Kelly_resistant GSE103030.CTCF.Kelly_resistant 142 bp overlap
ChIP Kelly_sensitive GSE103030.CTCF.Kelly_sensitive 211 bp overlap
ChIP Kelly_shB4-res GSE115248.CTCF.Kelly_shB4-res 135 bp overlap
ChIP Kelly_shLUC-res GSE115248.CTCF.Kelly_shLUC-res 136 bp overlap
ChIP LNCaP_Ctrl GSE125639.CTCF.LNCaP_Ctrl 190 bp overlap
ChIP Loucy ENCFF359TVQ 310 bp overlap
ChIP Loucy ENCSR464DKE.CTCF.Loucy 230 bp overlap
ChIP MCF-10A GSE98551.CTCF.MCF-10A 158 bp overlap
ChIP MCF-7 ENCFF198DQX 189 bp overlap
ChIP MCF-7 ENCFF414SZG 55 bp overlap
ChIP MCF-7 ENCFF424NQR 172 bp overlap
ChIP MCF-7 ENCFF494VXA 189 bp overlap
ChIP MCF-7 ENCFF844STM 94 bp overlap
ChIP MCF-7 ENCFF954TUV 178 bp overlap
ChIP MCF-7 ENCSR560BUE.CTCF.MCF-7 118 bp overlap
ChIP MCF-7 GSE137216.CTCF.MCF-7 132 bp overlap
ChIP MCF-7 GSE70764.CTCF.MCF-7 121 bp overlap
ChIP MCF-7 ENCSR000DMR.CTCF.MCF-7 173 bp overlap
ChIP MCF-7 ENCSR000DMS.CTCF.MCF-7 110 bp overlap
ChIP MCF-7 ERP000380.CTCF.MCF-7 118 bp overlap
ChIP MCF-7L_TAMR GSE108787.CTCF.MCF-7L_TAMR 192 bp overlap
ChIP MCF-7L_t0 GSE108787.CTCF.MCF-7L_t0 233 bp overlap
ChIP MCF-7L_t1 GSE108787.CTCF.MCF-7L_t1 181 bp overlap
ChIP MCF-7L_t24 GSE108787.CTCF.MCF-7L_t24 241 bp overlap
ChIP MCF-7_E2 ERP000380.CTCF.MCF-7_E2 108 bp overlap
ChIP MCF-7_HYPOXIA GSE78113.CTCF.MCF-7_HYPOXIA 217 bp overlap
ChIP MCF-7_TAM ERP000380.CTCF.MCF-7_TAM 112 bp overlap
ChIP NB4 ENCFF155DNY 223 bp overlap
ChIP NB4 ENCSR000DWN.CTCF.NB4 131 bp overlap
ChIP OVCAR-8 GSE70764.CTCF.OVCAR-8 207 bp overlap
ChIP SK-N-AS GSE101295.CTCF.SK-N-AS 196 bp overlap
ChIP SK-N-SH ENCSR000BLX.CTCF.SK-N-SH 92 bp overlap
ChIP T-47D_NaCl-isotonic GSE111923.CTCF.T-47D_NaCl-isotonic 260 bp overlap
ChIP THP-1_Pam3csk-000m-Flavo-000m GSE103477.CTCF.THP-1_Pam3csk-000m-Flavo-000m 243 bp overlap
ChIP THP-1_Pam3csk-000m-Flavo-240m GSE103477.CTCF.THP-1_Pam3csk-000m-Flavo-240m 199 bp overlap
ChIP THP-1_Pam3csk-020m-Flavo-000m GSE103477.CTCF.THP-1_Pam3csk-020m-Flavo-000m 217 bp overlap
ChIP THP-1_Pam3csk-025m-Flavo-000m GSE103477.CTCF.THP-1_Pam3csk-025m-Flavo-000m 180 bp overlap
ChIP THP-1_Pam3csk-030m-Flavo-000m GSE103477.CTCF.THP-1_Pam3csk-030m-Flavo-000m 145 bp overlap
ChIP THP-1_Pam3csk-045m-Flavo-000m GSE103477.CTCF.THP-1_Pam3csk-045m-Flavo-000m 289 bp overlap
ChIP THP-1_Pam3csk-120m-Flavo-000m GSE103477.CTCF.THP-1_Pam3csk-120m-Flavo-000m 151 bp overlap
ChIP THP-1_Pam3csk-150m-Flavo-030m GSE103477.CTCF.THP-1_Pam3csk-150m-Flavo-030m 195 bp overlap
ChIP THP-1_Pam3csk-180m-Flavo-060m GSE103477.CTCF.THP-1_Pam3csk-180m-Flavo-060m 217 bp overlap
ChIP THP-1_Pam3csk-360m-Flavo-240m GSE103477.CTCF.THP-1_Pam3csk-360m-Flavo-240m 124 bp overlap
ChIP THP-1_macrophage_PMA GSE96800.CTCF.THP-1_macrophage_PMA 218 bp overlap
ChIP THP-1_siCtrl-eGFP-Pam3csk-0h GSE103477.CTCF.THP-1_siCtrl-eGFP-Pam3csk-0h 190 bp overlap
ChIP THP-1_siNIPBL-NS1-Pam3csk-7h-Flavo-3h GSE103477.CTCF.THP-1_siNIPBL-NS1-Pam3csk-7h-Flavo-3h 137 bp overlap
ChIP THP-1_siWAPL-NS1-Pam3csk-7h-Flavo-3h GSE103477.CTCF.THP-1_siWAPL-NS1-Pam3csk-7h-Flavo-3h 169 bp overlap
ChIP WA01 ENCSR000BNH.CTCF.WA01 178 bp overlap
ChIP WA01 ENCSR000DLK.CTCF.WA01 194 bp overlap
ChIP WA01_NEUR GSE52457.CTCF.WA01_NEUR 235 bp overlap
ChIP WERI-Rb-1 ENCFF349QKF 197 bp overlap
ChIP anterior-temporal-cortex_adult GSE116825.CTCF.anterior-temporal-cortex_adult 152 bp overlap
ChIP brain microvascular endothelial cell ENCFF526VHE 217 bp overlap
ChIP endodermal cell ENCFF471YCZ 235 bp overlap
ChIP endothelial_brain-microvascular ENCSR000DTA.CTCF.endothelial_brain-microvascular 177 bp overlap
ChIP epithelial cell of proximal tubule ENCFF763ZKS 242 bp overlap
ChIP epithelial_proximal_tubule ENCSR000DXD.CTCF.epithelial_proximal_tubule 178 bp overlap
ChIP hESC_D0 GSE116862.CTCF.hESC_D0 195 bp overlap
ChIP hiPSC GSE115407.CTCF.hiPSC 204 bp overlap
ChIP hiPSC_CVI GSE106870.CTCF.hiPSC_CVI 181 bp overlap
ChIP hiPSC_IB12 GSE106870.CTCF.hiPSC_IB12 193 bp overlap
ChIP hiPSC_IB7 GSE106870.CTCF.hiPSC_IB7 145 bp overlap
ChIP hiPSC_IIA11 GSE106870.CTCF.hiPSC_IIA11 146 bp overlap
ChIP hiPSC_IV8 GSE106870.CTCF.hiPSC_IV8 145 bp overlap
ChIP hiPSC_failed-genome-editing GSE106870.CTCF.hiPSC_failed-genome-editing 208 bp overlap
ChIP hiPSC_parental-line GSE106870.CTCF.hiPSC_parental-line 166 bp overlap
ChIP keratinocyte ENCSR000DNC.CTCF.keratinocyte 117 bp overlap
ChIP leukemia GSE142161.CTCF.leukemia 215 bp overlap
ChIP myotube ENCSR000ANS.CTCF.myotube 173 bp overlap
ChIP neural progenitor cell ENCFF420RBO 282 bp overlap
ChIP neural progenitor cell ENCFF581WPG 181 bp overlap
ChIP neural_progenitor ENCSR125NBL.CTCF.neural_progenitor 190 bp overlap
ChIP neuron_bipolar_doxy_4d ENCSR619IUE.CTCF.neuron_bipolar_doxy_4d 140 bp overlap
ChIP osteocyte ENCFF929FPD 298 bp overlap
ChIP primary-epidermal-keratinocyte_diff_d0 GSE84657.CTCF.primary-epidermal-keratinocyte_diff_d0 146 bp overlap
ChIP primary-glioblastoma_G583 GSE121601.CTCF.primary-glioblastoma_G583 104 bp overlap
Cebpa 2 datasets
ChIP BLaER1 ENCFF031ISE 402 bp overlap
ChIP BLaER1 ENCFF262VBH 351 bp overlap
E2F6 3 datasets
Motif DE_12h DE_12h-E2F6_MA0471.3 8 bp overlap
ChIP H1 ENCFF785DWK 394 bp overlap
ChIP WA01 ENCSR000BSI.E2F6.WA01 227 bp overlap
E2F7 1 dataset
Motif DE_12h DE_12h-E2F7_MA0758.1 14 bp overlap
E2F8 1 dataset
Motif DE_12h DE_12h-E2F8_MA0865.3 9 bp overlap
ESR1 2 datasets
ChIP Ishikawa_siETV4-72h GSE129803.ESR1.Ishikawa_siETV4-72h 235 bp overlap
ChIP MCF-7 GSE119057.ESR1.MCF-7 154 bp overlap
EZH2 1 dataset
ChIP RH30_DMSO GSE85169.EZH2.RH30_DMSO 216 bp overlap
FEZF2 1 dataset
Motif DE_12h DE_12h-FEZF2_MA2341.1 8 bp overlap
FOSL2 1 dataset
Motif DE_12h DE_12h-FOSL2_MA0478.2 10 bp overlap
FOXP1 1 dataset
ChIP H9 GSE31006.FOXP1.H9 149 bp overlap
KLF17 1 dataset
Motif DE_12h DE_12h-KLF17_MA1514.2 14 bp overlap
MAFK 1 dataset
Motif DE_12h DE_12h-MAFK_MA0496.4 10 bp overlap
MSANTD3 1 dataset
Motif DE_12h DE_12h-MSANTD3_MA1523.2 7 bp overlap
NELFE 1 dataset
ChIP K-562_NHS GSE112379.NELFE.K-562_NHS 207 bp overlap
NKX2-2 1 dataset
Motif DE_12h DE_12h-NKX2-2_MA1645.2 8 bp overlap
PBX3 1 dataset
Motif DE_12h DE_12h-PBX3_MA1114.2 11 bp overlap
POU5F1 1 dataset
ChIP BG03 GSE21614.POU5F1.BG03 204 bp overlap
RAD21 15 datasets
ChIP H1 ENCFF698EWO 193 bp overlap
ChIP H1 ENCFF967OJF 225 bp overlap
ChIP HAP1 GSE152721.RAD21.HAP1 189 bp overlap
ChIP HepG2 ENCFF906QIS 187 bp overlap
ChIP Ishikawa ENCFF570JVV 222 bp overlap
ChIP Ishikawa ENCSR000BTU.RAD21.Ishikawa 106 bp overlap
ChIP K-562 ENCSR000BKV.RAD21.K-562 149 bp overlap
ChIP K-562_RF2-insertion GSE140868.RAD21.K-562_RF2-insertion 114 bp overlap
ChIP RH4 GSE83726.RAD21.RH4 217 bp overlap
ChIP WA09_heat-shock GSE105028.RAD21.WA09_heat-shock 145 bp overlap
ChIP hiPSC_CVI GSE106870.RAD21.hiPSC_CVI 127 bp overlap
ChIP hiPSC_IB12 GSE106870.RAD21.hiPSC_IB12 158 bp overlap
ChIP hiPSC_IIIB12 GSE106870.RAD21.hiPSC_IIIB12 151 bp overlap
ChIP hiPSC_IV8 GSE106870.RAD21.hiPSC_IV8 196 bp overlap
ChIP hiPSC_parental-line GSE106870.RAD21.hiPSC_parental-line 130 bp overlap
RELA 1 dataset
ChIP 786-O GSE86092.RELA.786-O 195 bp overlap
SMAD3 1 dataset
ChIP BG03 GSE36578.SMAD3.BG03 84 bp overlap
SMC1 1 dataset
ChIP HCT-116_RAD21-mAC GSE104888.SMC1.HCT-116_RAD21-mAC 169 bp overlap
SMC1A 1 dataset
ChIP A-549 GSE76893.SMC1A.A-549 161 bp overlap
SMC3 3 datasets
ChIP HeLa GSE126990.SMC3.HeLa 152 bp overlap
ChIP HeLa-Kyoto GSE102884.SMC3.HeLa-Kyoto 152 bp overlap
ChIP HeLa-Kyoto GSE138405.SMC3.HeLa-Kyoto 152 bp overlap
STAG1 1 dataset
ChIP MCF-7_E2 ERP000209.STAG1.MCF-7_E2 102 bp overlap
TBL1X 1 dataset
ChIP HEK293T GSE35197.TBL1X.HEK293T 193 bp overlap
TET2 1 dataset
ChIP Jurkat_NCKD GSE85524.TET2.Jurkat_NCKD 177 bp overlap
TRIM28 1 dataset
ChIP hESC GSE115387.TRIM28.hESC 182 bp overlap
ZBTB12 1 dataset
Motif DE_12h DE_12h-ZBTB12_MA1649.2 7 bp overlap
ZNF143 2 datasets
ChIP FLP143HA_T4 GSE39263.ZNF143.FLP143HA_T4 145 bp overlap
ChIP WA01 ENCSR000EBW.ZNF143.WA01 123 bp overlap
ZNF684 1 dataset
Motif DE_12h DE_12h-ZNF684_MA1600.2 14 bp overlap
Zic1::Zic2 1 dataset
Motif DE_12h DE_12h-Zic1Zic2_MA1628.2 7 bp overlap
Zic3 1 dataset
Motif DE_12h DE_12h-Zic3_MA0697.3 7 bp overlap
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