chr1 : 205,842,266 205,842,558
292 bp 17 TFs 1 linked gene
This 292 bp open chromatin element is linked to PM20D1 and is bound by 17 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
PM20D1 7.6 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr1:205,837,266 – 205,847,558
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
17 transcription factors
Source
Cell type
BRD4 2 datasets
ChIP Kelly_resistant GSE103030.BRD4.Kelly_resistant 146 bp overlap
ChIP Kelly_sensitive GSE103030.BRD4.Kelly_sensitive 292 bp overlap
ESR1 4 datasets
ChIP U2OS_100nM-E2 GSE151039.ESR1.U2OS_100nM-E2 75 bp overlap
ChIP U2OS_10nM-E2 GSE151039.ESR1.U2OS_10nM-E2 71 bp overlap
ChIP U2OS_10nM-E2-B GSE151039.ESR1.U2OS_10nM-E2-B 168 bp overlap
ChIP U2OS_E2 GSE26110.ESR1.U2OS_E2 73 bp overlap
ESRRG 1 dataset
ChIP cardiomyocyte GSE113760.ESRRG.cardiomyocyte 256 bp overlap
GATA2 2 datasets
ChIP SH-SY5Y ENCFF485YIB 292 bp overlap
ChIP SH-SY5Y ENCSR000EYB.GATA2.SH-SY5Y 218 bp overlap
GATA3 2 datasets
ChIP Kelly GSE94822.GATA3.Kelly 292 bp overlap
ChIP Kelly GSE65664.GATA3.Kelly 241 bp overlap
GATA4 2 datasets
ChIP DE DE-GATA4-1 292 bp overlap
ChIP DE DE-GATA4-2 292 bp overlap
GATA6 2 datasets
ChIP DE DE-GATA6-1 230 bp overlap
ChIP DE DE-GATA6-2 292 bp overlap
HAND2 3 datasets
ChIP CLB-Ga GSE90683.HAND2.CLB-Ga 231 bp overlap
ChIP Kelly GSE94822.HAND2.Kelly 237 bp overlap
ChIP SK-N-BE2-C GSE94822.HAND2.SK-N-BE2-C 211 bp overlap
ISL1 1 dataset
ChIP SK-N-BE2-C GSE94822.ISL1.SK-N-BE2-C 209 bp overlap
MYCN 2 datasets
ChIP Kelly GSE94822.MYCN.Kelly 277 bp overlap
ChIP Kelly_sensitive GSE115249.MYCN.Kelly_sensitive 292 bp overlap
OTX2 1 dataset
ChIP retina_Hu7 GSE137311.OTX2.retina_Hu7 196 bp overlap
PHOX2B 1 dataset
ChIP CLB-Ga GSE90683.PHOX2B.CLB-Ga 164 bp overlap
PITX3 1 dataset
ChIP SH-SY5Y GSE93275.PITX3.SH-SY5Y 286 bp overlap
REST 3 datasets
ChIP K-562 ENCSR000BMW.REST.K-562 62 bp overlap
ChIP neural ENCSR000BTV.REST.neural 163 bp overlap
ChIP neural cell ENCFF882LXX 292 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 292 bp overlap
TBX2 1 dataset
ChIP Kelly GSE94822.TBX2.Kelly 240 bp overlap
TFAP2B 1 dataset
ChIP SK-N-SH ENCFF869XXQ 292 bp overlap