chr11 : 89,062,756 – 89,063,325
569 bp 38 TFs 1 linked gene
This 569 bp open chromatin element is linked to GRM5 and is bound by 38 transcription factors.
Linked Genes
1 gene
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
GRM5 2.6 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr11:89,057,756 – 89,068,325
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
38 transcription factors
Source
Cell type
CTCF 2 datasets
ChIP brain microvascular endothelial cell ENCFF526VHE 281 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF476NBQ 425 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF031ISE 251 bp overlap
E2F6 1 dataset
ChIP H1 ENCFF785DWK 215 bp overlap
EHF 2 datasets
Motif DE_12h DE_12h-EHF_MA0598.4 9 bp overlap
Motif ES_0h ES_0h-EHF_MA0598.4 9 bp overlap
ELF1 2 datasets
Motif DE_12h DE_12h-ELF1_MA0473.4 9 bp overlap
Motif ES_0h ES_0h-ELF1_MA0473.4 9 bp overlap
ELF3 2 datasets
Motif DE_12h DE_12h-ELF3_MA0640.3 9 bp overlap
Motif ES_0h ES_0h-ELF3_MA0640.3 9 bp overlap
ETV1 2 datasets
Motif DE_12h DE_12h-ETV1_MA0761.3 9 bp overlap
Motif ES_0h ES_0h-ETV1_MA0761.3 9 bp overlap
EZH2 4 datasets
ChIP neural progenitor cell ENCFF018MKA 569 bp overlap
ChIP neural progenitor cell ENCFF018MKA 402 bp overlap
ChIP neural progenitor cell ENCFF018MKA 170 bp overlap
ChIP neural progenitor cell ENCFF472NFV 569 bp overlap
Erg 2 datasets
Motif DE_12h DE_12h-Erg_MA0474.4 10 bp overlap
Motif ES_0h ES_0h-Erg_MA0474.4 10 bp overlap
GABPA 2 datasets
Motif DE_12h DE_12h-GABPA_MA0062.4 10 bp overlap
Motif ES_0h ES_0h-GABPA_MA0062.4 10 bp overlap
IKZF2 2 datasets
Motif DE_12h DE_12h-IKZF2_MA2326.1 6 bp overlap
Motif ES_0h ES_0h-IKZF2_MA2326.1 6 bp overlap
INSM1 1 dataset
Motif DE_12h DE_12h-INSM1_MA0155.1 12 bp overlap
Ikzf3 2 datasets
Motif DE_12h DE_12h-Ikzf3_MA1992.2 9 bp overlap
Motif ES_0h ES_0h-Ikzf3_MA1992.2 9 bp overlap
MAX 1 dataset
ChIP H1 ENCFF914VQY 321 bp overlap
Nr2F6 2 datasets
Motif DE_12h DE_12h-Nr2F6_MA0728.1 15 bp overlap
Motif ES_0h ES_0h-Nr2F6_MA0728.1 15 bp overlap
PBX3 1 dataset
Motif ES_0h ES_0h-PBX3_MA1114.2 11 bp overlap
PKNOX1 1 dataset
Motif ES_0h ES_0h-PKNOX1_MA0782.3 10 bp overlap
POU5F1 1 dataset
ChIP DE_D1 DED1-OCT4_Batch_II 247 bp overlap
PRDM9 2 datasets
Motif DE_12h DE_12h-PRDM9_MA1723.2 20 bp overlap
Motif ES_0h ES_0h-PRDM9_MA1723.2 20 bp overlap
RAD21 1 dataset
ChIP neural cell ENCFF564MOT 361 bp overlap
REST 24 datasets
ChIP GM23338 ENCFF024TCL 265 bp overlap
ChIP GM23338 ENCSR871KYB.REST.GM23338 89 bp overlap
ChIP GM23338 ENCSR871KYB.REST.GM23338 91 bp overlap
ChIP H1 ENCFF203SWY 359 bp overlap
ChIP H1 ENCFF429RUE 126 bp overlap
ChIP HCT116 ENCFF929AYY 279 bp overlap
ChIP HCT116 ENCFF929AYY 301 bp overlap
ChIP HL-60 ENCFF589LOF 100 bp overlap
ChIP HeLa-S3 ENCFF911DTC 101 bp overlap
ChIP HeLa-S3 ENCSR000BMN.REST.HeLa-S3 131 bp overlap
ChIP HepG2 ENCFF122AWR 236 bp overlap
ChIP HepG2 ENCFF122AWR 291 bp overlap
ChIP Ishikawa ENCFF456OHV 199 bp overlap
ChIP Ishikawa ENCSR000BUU.REST.Ishikawa 120 bp overlap
ChIP Ishikawa ENCSR000BUU.REST.Ishikawa 117 bp overlap
ChIP MCF-7 ENCFF893RRD 123 bp overlap
ChIP PFSK-1 ENCFF845VHA 315 bp overlap
ChIP PFSK-1 ENCFF845VHA 321 bp overlap
ChIP Panc1 ENCFF518EEQ 481 bp overlap
ChIP SK-N-SH ENCFF635KBN 257 bp overlap
ChIP WA01 ENCSR000BHM.REST.WA01 162 bp overlap
ChIP WA01 ENCSR000BHM.REST.WA01 184 bp overlap
ChIP liver ENCFF240FWT 153 bp overlap
ChIP liver ENCFF577AZT 527 bp overlap
Rarb 2 datasets
Motif DE_12h DE_12h-Rarb_MA0857.1 16 bp overlap
Motif ES_0h ES_0h-Rarb_MA0857.1 16 bp overlap
SIN3A 2 datasets
ChIP H1 ENCFF896IJG 301 bp overlap
ChIP H1 ENCFF896IJG 301 bp overlap
SMC3 2 datasets
ChIP neural cell ENCFF795YGY 415 bp overlap
ChIP neural cell ENCFF795YGY 485 bp overlap
SPIB 2 datasets
Motif DE_12h DE_12h-SPIB_MA0081.3 13 bp overlap
Motif ES_0h ES_0h-SPIB_MA0081.3 13 bp overlap
SPIC 2 datasets
Motif DE_12h DE_12h-SPIC_MA0687.2 13 bp overlap
Motif ES_0h ES_0h-SPIC_MA0687.2 13 bp overlap
Spi1 2 datasets
Motif DE_12h DE_12h-Spi1_MA0080.7 13 bp overlap
Motif ES_0h ES_0h-Spi1_MA0080.7 13 bp overlap
THRA 2 datasets
Motif DE_12h DE_12h-THRA_MA1969.2 18 bp overlap
Motif ES_0h ES_0h-THRA_MA1969.2 18 bp overlap
VEZF1 2 datasets
Motif DE_12h DE_12h-VEZF1_MA1578.2 6 bp overlap
Motif ES_0h ES_0h-VEZF1_MA1578.2 6 bp overlap
ZIC1 2 datasets
Motif DE_12h DE_12h-ZIC1_MA0696.1 14 bp overlap
Motif ES_0h ES_0h-ZIC1_MA0696.1 14 bp overlap
ZIC4 2 datasets
Motif DE_12h DE_12h-ZIC4_MA0751.2 14 bp overlap
Motif ES_0h ES_0h-ZIC4_MA0751.2 14 bp overlap
ZIC5 2 datasets
Motif DE_12h DE_12h-ZIC5_MA1584.2 15 bp overlap
Motif ES_0h ES_0h-ZIC5_MA1584.2 15 bp overlap
ZNF175 2 datasets
Motif DE_12h DE_12h-ZNF175_MA2332.1 9 bp overlap
Motif ES_0h ES_0h-ZNF175_MA2332.1 9 bp overlap
ZNF257 2 datasets
Motif DE_12h DE_12h-ZNF257_MA1710.2 10 bp overlap
Motif ES_0h ES_0h-ZNF257_MA1710.2 10 bp overlap
ZNF417 2 datasets
Motif DE_12h DE_12h-ZNF417_MA1727.2 7 bp overlap
Motif ES_0h ES_0h-ZNF417_MA1727.2 7 bp overlap
ZNF418 2 datasets
Motif DE_12h DE_12h-ZNF418_MA1980.1 15 bp overlap
Motif ES_0h ES_0h-ZNF418_MA1980.1 15 bp overlap
Zic1::Zic2 2 datasets
Motif DE_12h DE_12h-Zic1Zic2_MA1628.2 7 bp overlap
Motif ES_0h ES_0h-Zic1Zic2_MA1628.2 7 bp overlap
Zic3 2 datasets
Motif DE_12h DE_12h-Zic3_MA0697.3 7 bp overlap
Motif ES_0h ES_0h-Zic3_MA0697.3 7 bp overlap
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