chr11 : 41,245,781 41,246,185
404 bp 29 TFs 0 linked genes
This 404 bp open chromatin element has no linked target genes and is bound by 29 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr11:41,240,781 – 41,251,185
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
29 transcription factors
Source
Cell type
AR 2 datasets
ChIP LNCaP-abl GSE39459.AR.LNCaP-abl 123 bp overlap
ChIP MCF-7 GSE48930.AR.MCF-7 187 bp overlap
ASCL1 1 dataset
Motif DE_60h DE_60h-ASCL1_MA1631.2 9 bp overlap
BRD4 2 datasets
ChIP LNCaP-clone-FGC_DHT-Enzalutamide GSE118247.BRD4.LNCaP-clone-FGC_DHT-Enzalutamide 197 bp overlap
ChIP hESC GSE33281.BRD4.hESC 95 bp overlap
CHD8 1 dataset
ChIP T-47D GSE62428.CHD8.T-47D 71 bp overlap
CTCF 179 datasets
ChIP 22Rv1 ENCFF466OXN 400 bp overlap
ChIP 22Rv1 ENCFF466OXN 404 bp overlap
ChIP 786-O_NORMOXIA GSE78113.CTCF.786-O_NORMOXIA 381 bp overlap
ChIP 81-3 ERP002246.CTCF.81-3 152 bp overlap
ChIP A-673 ENCSR611JJS.CTCF.A-673 161 bp overlap
ChIP BC-3 GSE135740.CTCF.BC-3 169 bp overlap
ChIP Caco-2 ENCFF934QYS 176 bp overlap
ChIP FT282 GSE131931.CTCF.FT282 214 bp overlap
ChIP FT282_EV GSE131931.CTCF.FT282_EV 144 bp overlap
ChIP GM04604 GSE148179.CTCF.GM04604 203 bp overlap
ChIP GM04648 GSE148179.CTCF.GM04648 188 bp overlap
ChIP GM06990 ENCFF471OQT 239 bp overlap
ChIP GM09236__B-lymphocytes GSE111170.CTCF.GM09236__B-lymphocytes 170 bp overlap
ChIP GM09237_B-lymphocytes GSE111170.CTCF.GM09237_B-lymphocytes 227 bp overlap
ChIP GM10266 ENCFF241YYF 177 bp overlap
ChIP GM12864 ENCFF357DQE 220 bp overlap
ChIP GM12864 ENCSR000DRB.CTCF.GM12864 120 bp overlap
ChIP GM12865 ENCFF067GFI 210 bp overlap
ChIP GM12865 ENCSR000DRE.CTCF.GM12865 138 bp overlap
ChIP GM12866 ENCSR000DRF.CTCF.GM12866 100 bp overlap
ChIP GM12871 ENCSR000DRL.CTCF.GM12871 147 bp overlap
ChIP GM12875 ENCFF081UCQ 186 bp overlap
ChIP GM12875 ENCSR000DRU.CTCF.GM12875 136 bp overlap
ChIP GM12878 ENCFF485TGR 222 bp overlap
ChIP GM12878 ENCFF511URZ 194 bp overlap
ChIP GM12878 ENCFF635MMB 194 bp overlap
ChIP GM12878 GSE76922.CTCF.GM12878 317 bp overlap
ChIP GM12878 ENCSR000DZN.CTCF.GM12878 176 bp overlap
ChIP GM12878 ENCSR000DKV.CTCF.GM12878 165 bp overlap
ChIP GM12878 ENCSR000DRZ.CTCF.GM12878 122 bp overlap
ChIP GM13977 ENCFF528ESQ 171 bp overlap
ChIP GM13977 ENCSR000DLB.CTCF.GM13977 119 bp overlap
ChIP GM23338 ENCFF531QOI 310 bp overlap
ChIP GM23338 ENCFF772DML 100 bp overlap
ChIP GSC23 GSE139416.CTCF.GSC23 62 bp overlap
ChIP H1 ENCFF230QSV 165 bp overlap
ChIP H1 ENCFF414GZI 197 bp overlap
ChIP H1 ENCFF764RHO 83 bp overlap
ChIP H9 ENCFF152GTF 245 bp overlap
ChIP HAP1 GSE152721.CTCF.HAP1 171 bp overlap
ChIP HAP1_clone21 GSE152721.CTCF.HAP1_clone21 190 bp overlap
ChIP HAP1_clone21_TSS-CRISPR GSE152721.CTCF.HAP1_clone21_TSS-CRISPR 216 bp overlap
ChIP HAP1_clone25 GSE152721.CTCF.HAP1_clone25 184 bp overlap
ChIP HEC-1-B GSE139679.CTCF.HEC-1-B 157 bp overlap
ChIP HEC-1-B_F-insertion GSE140868.CTCF.HEC-1-B_F-insertion 79 bp overlap
ChIP HEC-1-B_R1-mutation GSE140868.CTCF.HEC-1-B_R1-mutation 95 bp overlap
ChIP HEC-1-B_RF-mutation GSE140868.CTCF.HEC-1-B_RF-mutation 207 bp overlap
ChIP HEC-1-B_WT GSE140868.CTCF.HEC-1-B_WT 329 bp overlap
ChIP HEK293 ENCSR000DTW.CTCF.HEK293 104 bp overlap
ChIP HeLa_dC9Sun-D3A_CDCC85C GSE107607.CTCF.HeLa_dC9Sun-D3A_CDCC85C 148 bp overlap
ChIP ID00014 GSE76922.CTCF.ID00014 151 bp overlap
ChIP ID00016 GSE76922.CTCF.ID00016 220 bp overlap
ChIP Kelly_resistant GSE103030.CTCF.Kelly_resistant 190 bp overlap
ChIP Kelly_resistant_JQ1 GSE103030.CTCF.Kelly_resistant_JQ1 110 bp overlap
ChIP Kelly_sensitive GSE103030.CTCF.Kelly_sensitive 221 bp overlap
ChIP Kelly_shB4-res GSE115248.CTCF.Kelly_shB4-res 133 bp overlap
ChIP Kelly_shLUC-res GSE115248.CTCF.Kelly_shLUC-res 134 bp overlap
ChIP MCF-10AT1 GSE98551.CTCF.MCF-10AT1 154 bp overlap
ChIP MCF-7 ENCFF162GNE 203 bp overlap
ChIP MCF-7 ENCFF198DQX 216 bp overlap
ChIP MCF-7 ENCFF210JUZ 314 bp overlap
ChIP MCF-7 ENCFF414SZG 181 bp overlap
ChIP MCF-7 ENCFF424NQR 191 bp overlap
ChIP MCF-7 ENCFF494VXA 210 bp overlap
ChIP MCF-7 ENCFF844STM 191 bp overlap
ChIP MCF-7 ENCFF954TUV 197 bp overlap
ChIP MCF-7 ENCSR560BUE.CTCF.MCF-7 250 bp overlap
ChIP MCF-7 ENCSR000DMS.CTCF.MCF-7 138 bp overlap
ChIP MCF-7 ERP000380.CTCF.MCF-7 106 bp overlap
ChIP MCF-7 ENCSR000DMR.CTCF.MCF-7 172 bp overlap
ChIP MCF-7 ENCSR000AHD.CTCF.MCF-7 130 bp overlap
ChIP MCF-7L_t1 GSE108787.CTCF.MCF-7L_t1 291 bp overlap
ChIP MCF-7L_t16 GSE108787.CTCF.MCF-7L_t16 232 bp overlap
ChIP MCF-7L_t24 GSE108787.CTCF.MCF-7L_t24 200 bp overlap
ChIP MCF-7L_t4 GSE108787.CTCF.MCF-7L_t4 186 bp overlap
ChIP MCF-7_E2 ERP000380.CTCF.MCF-7_E2 175 bp overlap
ChIP MCF-7_TAM ERP000783.CTCF.MCF-7_TAM 145 bp overlap
ChIP MCF-7_TAM ERP000380.CTCF.MCF-7_TAM 140 bp overlap
ChIP MM1-S GSE43743.CTCF.MM1-S 211 bp overlap
ChIP NB69 GSE101295.CTCF.NB69 222 bp overlap
ChIP NCI-H929 ENCSR634OAQ.CTCF.NCI-H929 180 bp overlap
ChIP OCI-LY3 ENCFF939BYJ 222 bp overlap
ChIP OCI-Ly3 ENCSR756ZKG.CTCF.OCI-Ly3 300 bp overlap
ChIP OVCAR-8 GSE70764.CTCF.OVCAR-8 158 bp overlap
ChIP PC-3 ENCFF487TUI 313 bp overlap
ChIP PC-3 ENCSR359LOD.CTCF.PC-3 253 bp overlap
ChIP Peyer's patch ENCFF828IDE 281 bp overlap
ChIP Peyers-patch ENCSR799WDT.CTCF.Peyers-patch 175 bp overlap
ChIP Peyers-patch ENCSR375VXU.CTCF.Peyers-patch 203 bp overlap
ChIP SH-SY5Y GSE101295.CTCF.SH-SY5Y 120 bp overlap
ChIP SK-N-AS GSE101295.CTCF.SK-N-AS 185 bp overlap
ChIP SK-N-SH ENCFF575DMG 291 bp overlap
ChIP SK-N-SH ENCFF731NJX 207 bp overlap
ChIP SK-N-SH ENCSR000BLX.CTCF.SK-N-SH 151 bp overlap
ChIP SK-N-SH ENCSR000DXQ.CTCF.SK-N-SH 114 bp overlap
ChIP T-47D_triptolide GSE111923.CTCF.T-47D_triptolide 185 bp overlap
ChIP THP-1_Pam3csk-000m-Flavo-240m GSE103477.CTCF.THP-1_Pam3csk-000m-Flavo-240m 200 bp overlap
ChIP THP-1_Pam3csk-025m-Flavo-000m GSE103477.CTCF.THP-1_Pam3csk-025m-Flavo-000m 160 bp overlap
ChIP THP-1_Pam3csk-180m-Flavo-060m GSE103477.CTCF.THP-1_Pam3csk-180m-Flavo-060m 178 bp overlap
ChIP VCaP ENCSR265ARE.CTCF.VCaP 215 bp overlap
ChIP WA01 ENCSR000BNH.CTCF.WA01 166 bp overlap
ChIP WA01 ENCSR000DLK.CTCF.WA01 120 bp overlap
ChIP WA01_NEUR GSE52457.CTCF.WA01_NEUR 275 bp overlap
ChIP WERI-Rb-1 ENCFF349QKF 215 bp overlap
ChIP WERI-Rb-1 ENCSR000DXW.CTCF.WERI-Rb-1 135 bp overlap
ChIP ZR751 ERP000783.CTCF.ZR751 111 bp overlap
ChIP adrenal gland ENCFF596QXB 272 bp overlap
ChIP adrenal gland ENCFF678WUB 229 bp overlap
ChIP adrenal gland ENCFF886WNR 342 bp overlap
ChIP adrenal-gland ENCSR899JSO.CTCF.adrenal-gland 254 bp overlap
ChIP adrenal-gland ENCSR450BLH.CTCF.adrenal-gland 272 bp overlap
ChIP adrenal-gland ENCSR770IWO.CTCF.adrenal-gland 188 bp overlap
ChIP anterior-temporal-cortex_fetal GSE116825.CTCF.anterior-temporal-cortex_fetal 154 bp overlap
ChIP astrocyte_cerebellum ENCSR000DSZ.CTCF.astrocyte_cerebellum 216 bp overlap
ChIP brain ENCFF099ASU 340 bp overlap
ChIP brain ENCFF685VRG 358 bp overlap
ChIP cardiac-muscle ENCSR713SXF.CTCF.cardiac-muscle 219 bp overlap
ChIP cortical-interneuron_KCl-neg_JQ1-neg GSE117508.CTCF.cortical-interneuron_KCl-neg_JQ1-neg 206 bp overlap
ChIP cortical-interneuron_KCl-pos_JQ1-neg GSE117508.CTCF.cortical-interneuron_KCl-pos_JQ1-neg 181 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF038KTR 238 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF282ONV 248 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF373BUI 284 bp overlap
ChIP endodermal cell ENCFF471YCZ 250 bp overlap
ChIP epithelial cell of proximal tubule ENCFF763ZKS 260 bp overlap
ChIP epithelial_kidney ENCSR000DVH.CTCF.epithelial_kidney 137 bp overlap
ChIP epithelial_proximal_tubule ENCSR000DXD.CTCF.epithelial_proximal_tubule 245 bp overlap
ChIP hESC_D80 GSE116862.CTCF.hESC_D80 258 bp overlap
ChIP heart ENCSR232OFD.CTCF.heart 309 bp overlap
ChIP heart ENCSR778ZPK.CTCF.heart 281 bp overlap
ChIP heart ENCSR565HBN.CTCF.heart 162 bp overlap
ChIP heart left ventricle ENCFF185CKY 103 bp overlap
ChIP heart left ventricle ENCFF244ZHV 321 bp overlap
ChIP heart left ventricle ENCFF354HOQ 119 bp overlap
ChIP heart left ventricle ENCFF548XHH 266 bp overlap
ChIP heart left ventricle ENCFF575JEQ 342 bp overlap
ChIP heart left ventricle ENCFF769GAB 311 bp overlap
ChIP heart left ventricle ENCFF832OXT 317 bp overlap
ChIP heart left ventricle ENCFF888ERQ 304 bp overlap
ChIP heart left ventricle ENCFF987PUT 93 bp overlap
ChIP heart right ventricle ENCFF027ORH 312 bp overlap
ChIP heart right ventricle ENCFF063GTP 284 bp overlap
ChIP heart right ventricle ENCFF435TKW 309 bp overlap
ChIP heart right ventricle ENCFF577TID 270 bp overlap
ChIP heart right ventricle ENCFF725NNJ 288 bp overlap
ChIP heart right ventricle ENCFF725NNJ 402 bp overlap
ChIP heart right ventricle ENCFF979TCT 344 bp overlap
ChIP heart_left-ventricle ENCSR718SDR.CTCF.heart_left-ventricle 270 bp overlap
ChIP heart_left-ventricle ENCSR544APK.CTCF.heart_left-ventricle 222 bp overlap
ChIP heart_left-ventricle ENCSR791AYW.CTCF.heart_left-ventricle 268 bp overlap
ChIP hepatocyte ENCFF263BLJ 294 bp overlap
ChIP hepatocyte ERP000395.CTCF.hepatocyte 172 bp overlap
ChIP hiPSC_CVI GSE106870.CTCF.hiPSC_CVI 184 bp overlap
ChIP hiPSC_HUES9 GSE106870.CTCF.hiPSC_HUES9 161 bp overlap
ChIP hiPSC_IB12 GSE106870.CTCF.hiPSC_IB12 207 bp overlap
ChIP hiPSC_IB7 GSE106870.CTCF.hiPSC_IB7 214 bp overlap
ChIP hiPSC_IIA11 GSE106870.CTCF.hiPSC_IIA11 210 bp overlap
ChIP hiPSC_IIIB12 GSE106870.CTCF.hiPSC_IIIB12 145 bp overlap
ChIP hiPSC_IV8 GSE106870.CTCF.hiPSC_IV8 231 bp overlap
ChIP hiPSC_failed-genome-editing GSE106870.CTCF.hiPSC_failed-genome-editing 209 bp overlap
ChIP hiPSC_parental-line GSE106870.CTCF.hiPSC_parental-line 184 bp overlap
ChIP islet ERP004003.CTCF.islet 209 bp overlap
ChIP kidney epithelial cell ENCFF173LWY 230 bp overlap
ChIP left ventricle myocardium inferior ENCFF161DPW 231 bp overlap
ChIP liver ENCFF895ERR 210 bp overlap
ChIP liver ENCSR254YRM.CTCF.liver 191 bp overlap
ChIP neural progenitor cell ENCFF420RBO 142 bp overlap
ChIP neural_progenitor ENCSR125NBL.CTCF.neural_progenitor 213 bp overlap
ChIP neuron_bipolar_doxy_4d ENCSR619IUE.CTCF.neuron_bipolar_doxy_4d 181 bp overlap
ChIP primary-glioblastoma_G523 GSE121601.CTCF.primary-glioblastoma_G523 190 bp overlap
ChIP primary-glioblastoma_G567 GSE121601.CTCF.primary-glioblastoma_G567 142 bp overlap
ChIP primary-glioblastoma_G583 GSE121601.CTCF.primary-glioblastoma_G583 140 bp overlap
ChIP retina_Hu25 GSE137311.CTCF.retina_Hu25 257 bp overlap
ChIP retina_Hu6 GSE137311.CTCF.retina_Hu6 180 bp overlap
ChIP right atrium auricular region ENCFF696NTN 186 bp overlap
ChIP right lobe of liver ENCFF011NDG 207 bp overlap
ChIP right lobe of liver ENCFF011NDG 337 bp overlap
ChIP right lobe of liver ENCFF250KSY 291 bp overlap
ChIP right lobe of liver ENCFF523SCB 299 bp overlap
ChIP thyroid-gland ENCSR033KMZ.CTCF.thyroid-gland 213 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF460KDD 92 bp overlap
ESR1 9 datasets
ChIP MCF-7 GSE119057.ESR1.MCF-7 238 bp overlap
ChIP MCF-7_ER_t10 GSE119057.ESR1.MCF-7_ER_t10 179 bp overlap
ChIP MCF-7_ER_t20 GSE119057.ESR1.MCF-7_ER_t20 239 bp overlap
ChIP MCF-7_ER_t30 GSE119057.ESR1.MCF-7_ER_t30 198 bp overlap
ChIP MCF-7_ER_t50 GSE119057.ESR1.MCF-7_ER_t50 182 bp overlap
ChIP MCF-7_ER_t60 GSE119057.ESR1.MCF-7_ER_t60 199 bp overlap
ChIP MCF-7_ER_t70 GSE119057.ESR1.MCF-7_ER_t70 181 bp overlap
ChIP MCF-7_ER_t80 GSE119057.ESR1.MCF-7_ER_t80 192 bp overlap
ChIP MCF-7_ER_t90 GSE119057.ESR1.MCF-7_ER_t90 183 bp overlap
FIGLA 1 dataset
Motif DE_60h DE_60h-FIGLA_MA0820.2 6 bp overlap
GTF3C2 1 dataset
ChIP H9 GSE94418.GTF3C2.H9 194 bp overlap
KDM5B 1 dataset
ChIP T-47D GSE46055.KDM5B.T-47D 116 bp overlap
NFYB 1 dataset
ChIP WTC11 ENCFF751ZTQ 337 bp overlap
OLIG2 1 dataset
ChIP brain-prefrontal-cortex_2017014 GSE129039.OLIG2.brain-prefrontal-cortex_2017014 204 bp overlap
POU5F1 1 dataset
ChIP BG03 GSE21614.POU5F1.BG03 158 bp overlap
RAD21 33 datasets
ChIP GM12878 ENCFF046CBW 265 bp overlap
ChIP GM12878 ENCFF101UQZ 191 bp overlap
ChIP GM12878 ENCSR000BMY.RAD21.GM12878 175 bp overlap
ChIP GM12878 ENCSR000EAC.RAD21.GM12878 155 bp overlap
ChIP H1 ENCFF698EWO 145 bp overlap
ChIP H1 ENCFF967OJF 218 bp overlap
ChIP HEC-1-B_F-insertion GSE140868.RAD21.HEC-1-B_F-insertion 118 bp overlap
ChIP HEC-1-B_RF-insertion GSE140868.RAD21.HEC-1-B_RF-insertion 122 bp overlap
ChIP MCF-7 GSE72082.RAD21.MCF-7 144 bp overlap
ChIP MCF-7 ENCSR000BTQ.RAD21.MCF-7 164 bp overlap
ChIP MCF-7 ERP000209.RAD21.MCF-7 152 bp overlap
ChIP SK-N-SH ENCFF747MAS 212 bp overlap
ChIP SK-N-SH ENCSR000EHX.RAD21.SK-N-SH 120 bp overlap
ChIP THP-1 GSE55407.RAD21.THP-1 155 bp overlap
ChIP THP-1_PMA_IFNb-6h GSE103477.RAD21.THP-1_PMA_IFNb-6h 149 bp overlap
ChIP THP-1_Pam3csk-000m-Flavo-240m GSE103477.RAD21.THP-1_Pam3csk-000m-Flavo-240m 175 bp overlap
ChIP THP-1_Pam3csk-030m-Flavo-000m GSE103477.RAD21.THP-1_Pam3csk-030m-Flavo-000m 198 bp overlap
ChIP THP-1_Pam3csk-045m-Flavo-000m GSE103477.RAD21.THP-1_Pam3csk-045m-Flavo-000m 207 bp overlap
ChIP THP-1_Pam3csk-060m-Flavo-000m GSE103477.RAD21.THP-1_Pam3csk-060m-Flavo-000m 178 bp overlap
ChIP THP-1_Pam3csk-180m-Flavo-060m GSE103477.RAD21.THP-1_Pam3csk-180m-Flavo-060m 190 bp overlap
ChIP THP-1_eGFP-IFNb GSE103477.RAD21.THP-1_eGFP-IFNb 175 bp overlap
ChIP WA09 GSE105028.RAD21.WA09 262 bp overlap
ChIP WA09_heat-shock GSE105028.RAD21.WA09_heat-shock 217 bp overlap
ChIP hiPSC_CVI GSE106870.RAD21.hiPSC_CVI 224 bp overlap
ChIP hiPSC_IB12 GSE106870.RAD21.hiPSC_IB12 225 bp overlap
ChIP hiPSC_IIIB12 GSE106870.RAD21.hiPSC_IIIB12 245 bp overlap
ChIP hiPSC_IV8 GSE106870.RAD21.hiPSC_IV8 234 bp overlap
ChIP hiPSC_failed-genome-editing GSE106870.RAD21.hiPSC_failed-genome-editing 177 bp overlap
ChIP hiPSC_parental-line GSE106870.RAD21.hiPSC_parental-line 213 bp overlap
ChIP liver ENCFF289RIE 219 bp overlap
ChIP liver ENCFF485PAC 335 bp overlap
ChIP liver ENCFF522JHE 239 bp overlap
ChIP lymphoblast GSE155324.RAD21.lymphoblast 201 bp overlap
RELA 1 dataset
ChIP 786-O GSE86092.RELA.786-O 266 bp overlap
SMAD3 1 dataset
ChIP BG03 GSE36578.SMAD3.BG03 97 bp overlap
SMC3 1 dataset
ChIP GM12878 ENCFF085RLZ 253 bp overlap
SNAI1 1 dataset
Motif DE_60h DE_60h-SNAI1_MA1558.2 7 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 404 bp overlap
STAG1 4 datasets
ChIP HeLa GSE126990.STAG1.HeLa 275 bp overlap
ChIP HeLa-Kyoto GSE138405.STAG1.HeLa-Kyoto 275 bp overlap
ChIP MCF-7 ERP000209.STAG1.MCF-7 181 bp overlap
ChIP MCF-7_E2 ERP000209.STAG1.MCF-7_E2 175 bp overlap
TCF12 1 dataset
Motif DE_60h DE_60h-TCF12_MA1648.2 7 bp overlap
TCF3 1 dataset
Motif DE_60h DE_60h-TCF3_MA0522.4 7 bp overlap
TCF4 1 dataset
Motif DE_60h DE_60h-TCF4_MA0830.3 8 bp overlap
TP63 1 dataset
ChIP keratinocyte GSE33571.TP63.keratinocyte 134 bp overlap
ZBTB2 1 dataset
ChIP GM12878 GSE97661.ZBTB2.GM12878 119 bp overlap
ZBTB7A 1 dataset
ChIP VCaP_FBS GSE123089.ZBTB7A.VCaP_FBS 190 bp overlap
ZEB1 1 dataset
Motif DE_60h DE_60h-ZEB1_MA0103.4 6 bp overlap
ZNF549 1 dataset
Motif DE_60h DE_60h-ZNF549_MA1728.2 8 bp overlap
Zfp335 1 dataset
Motif DE_60h DE_60h-Zfp335_MA2002.2 7 bp overlap