chr11 : 39,593,669 39,594,268
599 bp 41 TFs 0 linked genes
This 599 bp open chromatin element has no linked target genes and is bound by 41 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr11:39,588,669 – 39,599,268
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
41 transcription factors
Source
Cell type
Crx 1 dataset
Motif DE_60h DE_60h-Crx_MA0467.3 6 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 409 bp overlap
ChIP DE DE-FOXA2-2 368 bp overlap
FOXP2 1 dataset
Motif DE_60h DE_60h-FOXP2_MA0593.2 9 bp overlap
GATA1 2 datasets
ChIP CD34_ERYTH_BIO GSE29194.GATA1.CD34_ERYTH_BIO 155 bp overlap
ChIP CD34_ERYTH_BMP GSE29194.GATA1.CD34_ERYTH_BMP 214 bp overlap
GATA2 2 datasets
Motif DE_60h DE_60h-GATA2_MA0036.4 7 bp overlap
ChIP TF1 GSE73207.GATA2.TF1 232 bp overlap
GATA4 7 datasets
ChIP DE DE-GATA4-1 427 bp overlap
ChIP DE DE-GATA4-2 499 bp overlap
Motif DE_60h DE_60h-GATA4_MA0482.3 8 bp overlap
ChIP Hep-G2 GSE135714.GATA4.Hep-G2 315 bp overlap
ChIP foregut GSE117136.GATA4.foregut 398 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 385 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 309 bp overlap
GATA5 1 dataset
Motif DE_60h DE_60h-GATA5_MA0766.3 8 bp overlap
GATA6 9 datasets
ChIP AGS GSE51705.GATA6.AGS 225 bp overlap
ChIP DE DE-GATA6-1 485 bp overlap
ChIP DE DE-GATA6-2 495 bp overlap
Motif DE_60h DE_60h-GATA6_MA1104.3 8 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 423 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 347 bp overlap
ChIP foregut GSE117136.GATA6.foregut 268 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA6.pancreatic-progenitor 365 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA6.pancreatic-progenitor_PP1 345 bp overlap
GSC 1 dataset
Motif DE_60h DE_60h-GSC_MA0648.2 6 bp overlap
GSC2 1 dataset
Motif DE_60h DE_60h-GSC2_MA0891.2 6 bp overlap
Gata3 1 dataset
Motif DE_60h DE_60h-Gata3_MA0037.5 8 bp overlap
KLF12 1 dataset
Motif DE_60h DE_60h-KLF12_MA0742.2 9 bp overlap
KLF3 1 dataset
Motif DE_60h DE_60h-KLF3_MA1516.2 10 bp overlap
LHX6 1 dataset
Motif DE_60h DE_60h-LHX6_MA0658.2 8 bp overlap
MAF 1 dataset
Motif DE_60h DE_60h-MAF_MA1520.2 13 bp overlap
MAFF 1 dataset
Motif DE_60h DE_60h-MAFF_MA0495.4 11 bp overlap
Mafb 1 dataset
Motif DE_60h DE_60h-Mafb_MA0117.3 11 bp overlap
NFE2 1 dataset
ChIP ProEs GSE59087.NFE2.ProEs 139 bp overlap
NFIB 1 dataset
Motif DE_60h DE_60h-NFIB_MA1643.2 17 bp overlap
NFIC 1 dataset
Motif DE_60h DE_60h-NFIC_MA1527.2 15 bp overlap
OTX1 1 dataset
Motif DE_60h DE_60h-OTX1_MA0711.2 6 bp overlap
OTX2 1 dataset
Motif DE_60h DE_60h-OTX2_MA0712.3 7 bp overlap
PITX1 1 dataset
Motif DE_60h DE_60h-PITX1_MA0682.3 6 bp overlap
PITX3 1 dataset
Motif DE_60h DE_60h-PITX3_MA0714.2 6 bp overlap
RHOXF1 1 dataset
Motif DE_60h DE_60h-RHOXF1_MA0719.2 6 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 547 bp overlap
SP5 1 dataset
Motif DE_60h DE_60h-SP5_MA1965.2 6 bp overlap
TAL1 1 dataset
ChIP ProEs GSE59087.TAL1.ProEs 190 bp overlap
TRPS1 1 dataset
Motif DE_60h DE_60h-TRPS1_MA1970.2 8 bp overlap
ZBTB6 1 dataset
Motif DE_60h DE_60h-ZBTB6_MA1581.2 9 bp overlap
ZNF135 1 dataset
Motif DE_60h DE_60h-ZNF135_MA1587.1 14 bp overlap
ZNF211 1 dataset
Motif DE_60h DE_60h-ZNF211_MA1974.2 10 bp overlap
ZNF460 1 dataset
Motif DE_60h DE_60h-ZNF460_MA1596.1 16 bp overlap
ZNF770 1 dataset
Motif DE_60h DE_60h-ZNF770_MA2099.1 8 bp overlap
Zfp809 1 dataset
Motif DE_60h DE_60h-Zfp809_MA2125.1 9 bp overlap