chr9 : 131,385,423 131,385,791
368 bp 27 TFs 1 linked gene
This 368 bp open chromatin element is linked to PRRC2B and is bound by 27 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
PRRC2B 8.3 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr9:131,380,423 – 131,390,791
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
27 transcription factors
Source
Cell type
AR 1 dataset
ChIP prostate-cancer GSE136128.AR.prostate-cancer 152 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF364PUR 51 bp overlap
DUX4 1 dataset
ChIP HEK293 GSE75791.DUX4.HEK293 268 bp overlap
ESR1 7 datasets
ChIP MCF-7_PaPE-1 GSE93510.ESR1.MCF-7_PaPE-1 205 bp overlap
ChIP MCF-7_PaPE-1_OA GSE93510.ESR1.MCF-7_PaPE-1_OA 368 bp overlap
ChIP T-47D ENCSR000BJS.ESR1.T-47D 250 bp overlap
ChIP T-47D_D538G GSE148277.ESR1.T-47D_D538G 224 bp overlap
ChIP T-47D_D538G_E2 GSE148277.ESR1.T-47D_D538G_E2 316 bp overlap
ChIP T-47D_Y537S GSE148277.ESR1.T-47D_Y537S 189 bp overlap
ChIP T-47D_Y537S_E2 GSE148277.ESR1.T-47D_Y537S_E2 263 bp overlap
EZH2 1 dataset
ChIP prostate-cancer_HA GSE107780.EZH2.prostate-cancer_HA 157 bp overlap
FOXA1 15 datasets
ChIP LNCaP_L388M_shFOXA1 GSE128883.FOXA1.LNCaP_L388M_shFOXA1 165 bp overlap
ChIP MCF-7_E2 GSE60270.FOXA1.MCF-7_E2 246 bp overlap
ChIP T-47D_8h GSE137579.FOXA1.T-47D_8h 238 bp overlap
ChIP T-47D_CR3flp GSE99479.FOXA1.T-47D_CR3flp 263 bp overlap
ChIP T-47D_DMSO GSE84593.FOXA1.T-47D_DMSO 292 bp overlap
ChIP T-47D_JC4743 GSE126004.FOXA1.T-47D_JC4743 317 bp overlap
ChIP T-47D_JC4744 GSE126004.FOXA1.T-47D_JC4744 255 bp overlap
ChIP T-47D_JC4745 GSE126004.FOXA1.T-47D_JC4745 351 bp overlap
ChIP T-47D_JC4747 GSE126004.FOXA1.T-47D_JC4747 368 bp overlap
ChIP T-47D_JC4748 GSE126004.FOXA1.T-47D_JC4748 332 bp overlap
ChIP T-47D_flp-ctrl GSE99479.FOXA1.T-47D_flp-ctrl 200 bp overlap
ChIP T-47D_shRNF2 GSE137579.FOXA1.T-47D_shRNF2 244 bp overlap
ChIP T-47D_shRNF2_24h GSE137579.FOXA1.T-47D_shRNF2_24h 222 bp overlap
ChIP T-47D_shRNF2_45min GSE137579.FOXA1.T-47D_shRNF2_45min 208 bp overlap
ChIP T-47D_shRNF2_8h GSE137579.FOXA1.T-47D_shRNF2_8h 244 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 359 bp overlap
ChIP DE DE-FOXA2-2 316 bp overlap
GATA6 1 dataset
ChIP DE_D1 S41-DE-d1-GATA6-exp2 259 bp overlap
GRHL2 5 datasets
ChIP MCF-7 GSE109820.GRHL2.MCF-7 184 bp overlap
ChIP MCF-7 GSE99680.GRHL2.MCF-7 144 bp overlap
ChIP MCF-7-WS8_VEH GSE113092.GRHL2.MCF-7-WS8_VEH 229 bp overlap
ChIP OVCA429 GSE71018.GRHL2.OVCA429 126 bp overlap
ChIP T-47D GSE99680.GRHL2.T-47D 249 bp overlap
HDAC3 1 dataset
ChIP RH4_DMSO-6H GSE116344.HDAC3.RH4_DMSO-6H 69 bp overlap
KDM5B 2 datasets
ChIP SUM185_SHCTCF GSE46055.KDM5B.SUM185_SHCTCF 78 bp overlap
ChIP T-47D GSE46055.KDM5B.T-47D 115 bp overlap
MTA2 1 dataset
ChIP RH4 GSE155861.MTA2.RH4 282 bp overlap
MYOD1 4 datasets
ChIP RH30_DMSO GSE85169.MYOD1.RH30_DMSO 198 bp overlap
ChIP RH4 GSE83726.MYOD1.RH4 152 bp overlap
ChIP myoblast GSE50413.MYOD1.myoblast 152 bp overlap
ChIP rhabdomyosarcoma GSE50413.MYOD1.rhabdomyosarcoma 140 bp overlap
MYOG 1 dataset
ChIP RH4_Entinostat-6H GSE116344.MYOG.RH4_Entinostat-6H 151 bp overlap
NEUROD1 1 dataset
ChIP D283-Med GSE92582.NEUROD1.D283-Med 331 bp overlap
NR3C1 1 dataset
ChIP T47D-A1-2_Dex GSE112491.NR3C1.T47D-A1-2_Dex 92 bp overlap
NRIP1 1 dataset
ChIP MCF-7 ERP005838.NRIP1.MCF-7 125 bp overlap
PGR 1 dataset
ChIP T-47D_PROG GSE68355.PGR.T-47D_PROG 147 bp overlap
PHIP 1 dataset
ChIP HCT-116_MLL1-KO__ab833 GSE101646.PHIP.HCT-116_MLL1-KO__ab833 194 bp overlap
POU2F1 1 dataset
ChIP T-47D_D538G GSE148277.POU2F1.T-47D_D538G 184 bp overlap
SMARCB1 1 dataset
ChIP MCF-7_DCDT GSE123284.SMARCB1.MCF-7_DCDT 228 bp overlap
SREBP2 2 datasets
ChIP monocyte GSE129202.SREBP2.monocyte 368 bp overlap
ChIP monocyte_TNF GSE129202.SREBP2.monocyte_TNF 368 bp overlap
STAT3 3 datasets
ChIP HCC1187 GSE152203.STAT3.HCC1187 175 bp overlap
ChIP T-47D_JC4757 GSE126004.STAT3.T-47D_JC4757 173 bp overlap
ChIP T-47D_JC5056 GSE126004.STAT3.T-47D_JC5056 200 bp overlap
TAL1 1 dataset
ChIP PRIMA2 GSE33850.TAL1.PRIMA2 161 bp overlap
TEAD4 2 datasets
ChIP Ishikawa ENCSR000BSW.TEAD4.Ishikawa 156 bp overlap
ChIP T-47D_Veh GSE125594.TEAD4.T-47D_Veh 229 bp overlap
TRPS1 1 dataset
ChIP T-47D GSE107013.TRPS1.T-47D 114 bp overlap