chr9 : 119,367,536 119,368,103
567 bp 23 TFs 1 linked gene
This 567 bp open chromatin element is linked to BRINP1 and is bound by 23 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
BRINP1 1.3 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr9:119,362,536 – 119,373,103
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
23 transcription factors
Source
Cell type
BRD1 1 dataset
ChIP HUES-64 GSE104059.BRD1.HUES-64 202 bp overlap
BRD4 1 dataset
ChIP RH4 GSE83726.BRD4.RH4 106 bp overlap
CTBP2 2 datasets
ChIP H1 ENCFF329MAX 438 bp overlap
ChIP H1 ENCFF329MAX 389 bp overlap
CTCF 2 datasets
ChIP RH4 GSE83726.CTCF.RH4 225 bp overlap
ChIP RH4 GSE83726.CTCF.RH4 203 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF460KDD 88 bp overlap
ESR1 1 dataset
ChIP MCF-7_MRNAHIST ERP002305.ESR1.MCF-7_MRNAHIST 211 bp overlap
EZH2 6 datasets
ChIP A-1847 GSE95643.EZH2.A-1847 108 bp overlap
ChIP GM23248 ENCSR131FFJ.EZH2.GM23248 231 bp overlap
ChIP LNCaP-abl GSE39459.EZH2.LNCaP-abl 203 bp overlap
ChIP THP-1 GSE135024.EZH2.THP-1 160 bp overlap
ChIP THP-1 GSE135024.EZH2.THP-1 262 bp overlap
ChIP keratinocyte ENCSR000ARK.EZH2.keratinocyte 371 bp overlap
FOXA2 1 dataset
ChIP DE DE-FOXA2-2 120 bp overlap
GATA6 1 dataset
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 80 bp overlap
HDAC2 1 dataset
ChIP RH4_Entinostat-6H GSE116344.HDAC2.RH4_Entinostat-6H 236 bp overlap
HDAC3 1 dataset
ChIP RH4_DMSO-6H GSE116344.HDAC3.RH4_DMSO-6H 198 bp overlap
MAFB 1 dataset
ChIP islet ERP004003.MAFB.islet 80 bp overlap
MAX 1 dataset
ChIP NCI-H2171 GSE41105.MAX.NCI-H2171 84 bp overlap
MED1 1 dataset
ChIP RH4 GSE83726.MED1.RH4 350 bp overlap
MYOD1 1 dataset
ChIP RH4 GSE83726.MYOD1.RH4 176 bp overlap
MYOG 1 dataset
ChIP RH4 GSE83726.MYOG.RH4 97 bp overlap
RAD21 1 dataset
ChIP RH4 GSE83726.RAD21.RH4 567 bp overlap
REST 1 dataset
ChIP colorectal-cancer_shCDH1 GSE112555.REST.colorectal-cancer_shCDH1 377 bp overlap
SMAD2-3 2 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 129 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 471 bp overlap
SMAD2_3 2 datasets
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 93 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 134 bp overlap
SUZ12 2 datasets
ChIP LNCaP GSE39459.SUZ12.LNCaP 212 bp overlap
ChIP hiPSC GSE124903.SUZ12.hiPSC 248 bp overlap
TFAP2C 1 dataset
ChIP UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc 339 bp overlap