chr9 : 94,265,485 94,266,084
599 bp 31 TFs 2 linked genes
This 599 bp open chromatin element is linked to ZNF169 and LINC02603 and is bound by 31 transcription factors.
Linked Genes
2 genes
Gene Expression Dist. to TSS Distance Link type
ZNF169 6.2 kb Proximal Proximity
LINC02603 6.2 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr9:94,260,485 – 94,271,084
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
31 transcription factors
Source
Cell type
ARID1B 1 dataset
ChIP K562 ENCFF938UXQ 261 bp overlap
BHLHE40 1 dataset
ChIP GM12878 ENCFF521IZR 349 bp overlap
CBFA2T3 1 dataset
ChIP K562 ENCFF673OEZ 411 bp overlap
CDX2 4 datasets
ChIP Caco-2_DIFF GSE23436.CDX2.Caco-2_DIFF 163 bp overlap
ChIP Caco-2_PROLIF GSE23436.CDX2.Caco-2_PROLIF 149 bp overlap
ChIP LS180 GSE31939.CDX2.LS180 146 bp overlap
ChIP LS180_125 GSE31939.CDX2.LS180_125 215 bp overlap
CTNNB1 1 dataset
ChIP LS180 GSE31939.CTNNB1.LS180 124 bp overlap
DPF2 2 datasets
ChIP K562 ENCFF775HUO 577 bp overlap
ChIP K562 ENCFF775HUO 391 bp overlap
FOXA1 2 datasets
ChIP LS180 GSE140533.FOXA1.LS180 64 bp overlap
ChIP LS180 GSE140533.FOXA1.LS180 155 bp overlap
FOXA2 4 datasets
ChIP Caco-2 GSE66218.FOXA2.Caco-2 254 bp overlap
ChIP DE DE-FOXA2-1 599 bp overlap
ChIP DE DE-FOXA2-2 599 bp overlap
ChIP PANC-1_HNF1B-OE GSE119930.FOXA2.PANC-1_HNF1B-OE 541 bp overlap
GATA1 1 dataset
ChIP K562 ENCFF094CMK 251 bp overlap
GATA2 2 datasets
ChIP HepG2 ENCFF905PYM 371 bp overlap
ChIP K562 ENCFF544PCK 251 bp overlap
GATA4 4 datasets
ChIP DE DE-GATA4-1 599 bp overlap
ChIP DE DE-GATA4-2 599 bp overlap
ChIP foregut GSE117136.GATA4.foregut 317 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 519 bp overlap
GATA6 17 datasets
ChIP AGS GSE51705.GATA6.AGS 316 bp overlap
ChIP Caco-2_PROLIF GSE23436.GATA6.Caco-2_PROLIF 226 bp overlap
ChIP DE DE-GATA6-1 599 bp overlap
ChIP DE DE-GATA6-2 599 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 582 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 582 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 599 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 561 bp overlap
ChIP ESO-26 GSE132680.GATA6.ESO-26 546 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 484 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 503 bp overlap
ChIP PATU8988 GSE47535.GATA6.PATU8988 354 bp overlap
ChIP PATU8988 GSE47535.GATA6.PATU8988 173 bp overlap
ChIP YCC-3 GSE51705.GATA6.YCC-3 341 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 388 bp overlap
ChIP foregut GSE117136.GATA6.foregut 366 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA6.pancreatic-progenitor 353 bp overlap
HLF 1 dataset
ChIP HepG2 ENCFF854JLR 245 bp overlap
HNF1B 1 dataset
ChIP PANC-1_HNF1B-OE GSE119930.HNF1B.PANC-1_HNF1B-OE 451 bp overlap
HNF4A 1 dataset
ChIP Caco-2_PROLIF GSE23436.HNF4A.Caco-2_PROLIF 79 bp overlap
IKZF1 1 dataset
ChIP K562 ENCFF348IBL 491 bp overlap
NCOA1 1 dataset
ChIP LS180 GSE39277.NCOA1.LS180 99 bp overlap
NCOR2 1 dataset
ChIP LS180_125 GSE39277.NCOR2.LS180_125 108 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 355 bp overlap
SMAD2_3 5 datasets
ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 268 bp overlap
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 394 bp overlap
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 296 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 544 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 407 bp overlap
SMAD4 1 dataset
ChIP Caco-2 GSE112946.SMAD4.Caco-2 133 bp overlap
SMARCC1 1 dataset
ChIP DE_D1 S15-DE-d1-BAF155-exp1 247 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 209 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 315 bp overlap
TAL1 1 dataset
ChIP K562 ENCFF620GMX 385 bp overlap
TCF12 1 dataset
ChIP K562 ENCFF931DJY 391 bp overlap
ZEB2 1 dataset
ChIP K562 ENCFF795CMH 477 bp overlap
ZFX 1 dataset
ChIP K562 ENCFF536AJO 267 bp overlap
ZNF121 1 dataset
ChIP HepG2 ENCFF343YSL 289 bp overlap
ZNF770 1 dataset
ChIP HepG2 ENCFF233UVH 302 bp overlap