Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

42 transcription factors

CREB1 2 datasets

ChIP MCF-7 ENCFF341ZEM 108 bp overlap

ChIP MCF-7 ENCFF867SAS 79 bp overlap

Cebpa 1 dataset

ChIP BLaER1 ENCFF274GAT 316 bp overlap

DUX4 1 dataset

ChIP WA01 GSE94322.DUX4.WA01 192 bp overlap

EOMES 1 dataset

ChIP hESC GSE26097.EOMES.hESC 343 bp overlap

FOSL2::JUN 2 datasets

Motif DE_36h DE_36h-FOSL2JUN_MA1131.2 10 bp overlap

Motif DE_48h DE_48h-FOSL2JUN_MA1131.2 10 bp overlap

FOXA2 2 datasets

ChIP DE DE-FOXA2-1 691 bp overlap

ChIP DE DE-FOXA2-2 458 bp overlap

GATA4 2 datasets

ChIP DE DE-GATA4-1 465 bp overlap

ChIP DE DE-GATA4-2 466 bp overlap

GATA6 5 datasets

ChIP DE DE-GATA6-1 462 bp overlap

ChIP DE DE-GATA6-2 624 bp overlap

ChIP DE_D2 S55-DE-d2-GATA6-exp2 394 bp overlap

ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 300 bp overlap

ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 286 bp overlap

HDAC3 1 dataset

ChIP RH4_DMSO-6H GSE116344.HDAC3.RH4_DMSO-6H 221 bp overlap

IRF2 2 datasets

Motif DE_36h DE_36h-IRF2_MA0051.2 16 bp overlap

Motif DE_48h DE_48h-IRF2_MA0051.2 16 bp overlap

IRF4 2 datasets

Motif DE_36h DE_36h-IRF4_MA1419.2 14 bp overlap

Motif DE_48h DE_48h-IRF4_MA1419.2 14 bp overlap

IRF8 2 datasets

Motif DE_36h DE_36h-IRF8_MA0652.2 13 bp overlap

Motif DE_48h DE_48h-IRF8_MA0652.2 13 bp overlap

Irf1 2 datasets

Motif DE_36h DE_36h-Irf1_MA0050.4 11 bp overlap

Motif DE_48h DE_48h-Irf1_MA0050.4 11 bp overlap

JUND 2 datasets

Motif DE_36h DE_36h-JUND_MA0492.2 11 bp overlap

Motif DE_48h DE_48h-JUND_MA0492.2 11 bp overlap

MEIS1 3 datasets

Motif DE_36h DE_36h-MEIS1_MA0498.3 5 bp overlap

Motif DE_48h DE_48h-MEIS1_MA0498.3 5 bp overlap

NANOG 1 dataset

ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 181 bp overlap

NFKB1 1 dataset

ChIP L1236 GSE63736.NFKB1.L1236 90 bp overlap

NR1D2 2 datasets

Motif DE_36h DE_36h-NR1D2_MA1532.2 15 bp overlap

Motif DE_48h DE_48h-NR1D2_MA1532.2 15 bp overlap

PKNOX1 2 datasets

Motif DE_36h DE_36h-PKNOX1_MA0782.3 10 bp overlap

Motif DE_48h DE_48h-PKNOX1_MA0782.3 10 bp overlap

POU3F2 2 datasets

Motif DE_36h DE_36h-POU3F2_MA0787.1 12 bp overlap

Motif DE_48h DE_48h-POU3F2_MA0787.1 12 bp overlap

POU5F1 1 dataset

ChIP hESC_NAIVE GSE69646.POU5F1.hESC_NAIVE 114 bp overlap

Pou5f1::Sox2 2 datasets

Motif DE_36h DE_36h-Pou5f1Sox2_MA0142.1 15 bp overlap

Motif DE_48h DE_48h-Pou5f1Sox2_MA0142.1 15 bp overlap

SMAD2 1 dataset

ChIP endoderm GSE29422.SMAD2.endoderm 192 bp overlap

SMAD2-3 2 datasets

ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 495 bp overlap

ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 282 bp overlap

SMAD2_3 2 datasets

ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 501 bp overlap

ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 571 bp overlap

SMAD4 1 dataset

ChIP endoderm GSE29422.SMAD4.endoderm 160 bp overlap

SOX17 1 dataset

ChIP DE_D2 DED2-SOX17_Batch_II 566 bp overlap

SOX17_M 1 dataset

ChIP DE_D2 DED2-SOX17-M_Batch_II 550 bp overlap

SOX18 1 dataset

Motif DE_48h DE_48h-SOX18_MA1563.2 8 bp overlap

SOX8 1 dataset

Motif DE_48h DE_48h-SOX8_MA0868.3 7 bp overlap

SOX9 1 dataset

Motif DE_48h DE_48h-SOX9_MA0077.2 8 bp overlap

SRY 1 dataset

Motif DE_48h DE_48h-SRY_MA0084.2 7 bp overlap

Sox5 1 dataset

Motif DE_48h DE_48h-Sox5_MA0087.3 8 bp overlap

Sox6 1 dataset

Motif DE_48h DE_48h-Sox6_MA0515.1 10 bp overlap

Sox7 1 dataset

Motif DE_48h DE_48h-Sox7_MA2095.1 10 bp overlap

TBX21 1 dataset

Motif DE_48h DE_48h-TBX21_MA0690.3 10 bp overlap

TRIM28 1 dataset

ChIP WIBR3_NAIVE GSE84382.TRIM28.WIBR3_NAIVE 162 bp overlap

Tbx6 1 dataset

Motif DE_48h DE_48h-Tbx6_MA1567.3 9 bp overlap

ZNF157 1 dataset

Motif DE_48h DE_48h-ZNF157_MA2331.1 21 bp overlap

ZNF354C 1 dataset

Motif DE_48h DE_48h-ZNF354C_MA0130.1 6 bp overlap

ZNF462 1 dataset

ChIP GM23338 ENCSR334UWP.ZNF462.GM23338 544 bp overlap

ZNF684 2 datasets

Motif DE_36h DE_36h-ZNF684_MA1600.2 14 bp overlap

Motif DE_48h DE_48h-ZNF684_MA1600.2 14 bp overlap

Genome Browser